RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
LCN1-202ENST00000371781 TCHHQ07283 1943 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 PRPF3O43395 683 aaKnown RBP12.63□□□□□ -0.39
LCN1-202ENST00000371781 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
LCN1-202ENST00000371781 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
LCN1-202ENST00000371781 CDKL5O76039 1030 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 VEGFBP49765 207 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 FAM173BQ6P4H8 233 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
LCN1-202ENST00000371781 RLFQ13129 1914 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 LOC285556D6RIA3 1793 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 TMEM88BA6NKF7 163 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 BAG4O95429 457 aaKnown RBP12.62□□□□□ -0.39
LCN1-202ENST00000371781 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
LCN1-202ENST00000371781 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
LCN1-202ENST00000371781 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 NOL9Q5SY16 702 aaKnown RBP12.62□□□□□ -0.39
LCN1-202ENST00000371781 SLFN13Q68D06 897 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 KRT40Q6A162 431 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 MOB2Q70IA6 237 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 KCTD1Q719H9 257 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 KRT26Q7Z3Y9 468 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 GMCL1P1Q8NEA9 526 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
LCN1-202ENST00000371781 ZKSCAN4Q969J2 545 aaPredicted RBP12.62□□□□□ -0.39
LCN1-202ENST00000371781 WRNIP1Q96S55 665 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 UBA5Q9GZZ9 404 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 SNCAIPQ9Y6H5 919 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
LCN1-202ENST00000371781 CCDC196A0A1B0GTZ2 297 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 KLRF2D3W0D1 207 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 F5H6K3 240 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 TRAF5O00463 557 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 PPP1R11O60927 126 aaPredicted RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 DEXIO95424 95 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 ASNSP08243 561 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 TAL1P17542 331 aaPredicted RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 KIF5BP33176 963 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 KLRC3Q07444 240 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 PRKG1Q13976 671 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 SULF1Q8IWU6 871 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 SCYL3Q8IZE3 742 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 DCAF4Q8WV16 495 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 GMCL1Q96IK5 515 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 C8orf76Q96K31 380 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 RIOX1Q9H6W3 641 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 PRDM10Q9NQV6 1147 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 VPS54Q9P1Q0 977 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
LCN1-202ENST00000371781 V9GY48 417 aaPredicted RBP12.61□□□□□ -0.39
LCN1-202ENST00000371781 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 PDCP20941 246 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 SLC16A2P36021 539 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 CTCFP49711 727 aaPredicted RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 PFKFB3Q16875 520 aaPredicted RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 NOM1Q5C9Z4 860 aaKnown RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 MAP1SQ66K74 1059 aaPredicted RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 WWC2Q6AWC2 1192 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
LCN1-202ENST00000371781 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 GPKOWQ92917 476 aaPredicted RBP eCLIP12.6□□□□□ -0.39
LCN1-202ENST00000371781 PIGSQ96S52 555 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
LCN1-202ENST00000371781 STXBP3O00186 592 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 SCG2P13521 617 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 PTPRAP18433 802 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 MCM4P33991 863 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 GNAQP50148 359 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 LBX1P52954 281 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 VGLL4Q14135 290 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
LCN1-202ENST00000371781 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
LCN1-202ENST00000371781 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 TNFRSF25Q93038 417 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 CLMNQ96JQ2 1002 aa12.59□□□□□ -0.39
LCN1-202ENST00000371781 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms