RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 PURBQ96QR8 312 aaKnown RBP8.12□□□□□ -1.11
USP1-202ENST00000371146 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 SLC27A2O14975 620 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 TTLL1O95922 423 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
USP1-202ENST00000371146 CYP2C19P33261 490 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 CA8P35219 290 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 GTF2A2P52657 109 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 PABPC4Q13310 644 aaKnown RBP eCLIP8.12□□□□□ -1.113e-8■■■□□ 16
USP1-202ENST00000371146 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 ZNF668Q96K58 619 aaPredicted RBP8.12□□□□□ -1.11
USP1-202ENST00000371146 GMLQ99445 158 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 ARHGAP39Q9C0H5 1083 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 R3HDMLQ9H3Y0 253 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 GJB4Q9NTQ9 266 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 RIC1Q4ADV7 1423 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 ENTPD3O75355 529 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 TFRCP02786 760 aaKnown RBP8.11□□□□□ -1.11
USP1-202ENST00000371146 SP3Q02447 781 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 RTN1Q16799 776 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 BMP2KLQ5H9B9 411 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 RASGRP4Q8TDF6 673 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 AGBL1Q96MI9 1066 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 RIOK1Q9BRS2 568 aaKnown RBP8.11□□□□□ -1.11
USP1-202ENST00000371146 SMC3Q9UQE7 1217 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 NEDD4P46934 1319 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 GOLGA6L4A6NEF3 574 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 FOXN1O15353 648 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 NDUFB10O96000 172 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 IGBP1P78318 339 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 SPRYD7Q5W111 196 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 TMEM179Q6ZVK1 233 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 CUL5Q93034 780 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.11□□□□□ -1.11
USP1-202ENST00000371146 STAG2Q8N3U4 1231 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 TMEM47Q9BQJ4 181 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 CREBZFQ9NS37 354 aa8.11□□□□□ -1.11
USP1-202ENST00000371146 A0A087WWV3 80 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 TTC36A6NLP5 189 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 POTEB2H3BUK9 544 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 CTNND1O60716 968 aaKnown RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 STAT3P40763 770 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 STAT2P52630 851 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 JAG1P78504 1218 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 RRP1BQ14684 758 aaKnown RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 MAEAQ7L5Y9 396 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 FASTKD5Q7L8L6 764 aaKnown RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 BRI3BPQ8WY22 251 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 ASCC2Q9H1I8 757 aaPredicted RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 PCDHA1Q9Y5I3 950 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 LTBP3Q9NS15 1303 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 BACH1O14867 736 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 SAFBQ15424 915 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP1-202ENST00000371146 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 SLC30A10Q6XR72 485 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 ZNF296Q8WUU4 475 aaPredicted RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 PIGSQ96S52 555 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 ZSCAN10Q96SZ4 725 aaPredicted RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 PLIN2Q99541 437 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 HERC5Q9UII4 1024 aaKnown RBP8.1□□□□□ -1.11
USP1-202ENST00000371146 PNMA3Q9UL41 463 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 KCNJ14Q9UNX9 436 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 SH3BP1Q9Y3L3 701 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 C5P01031 1676 aa8.1□□□□□ -1.11
USP1-202ENST00000371146 A0A1W2PRG0 241 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP1-202ENST00000371146 RASA1P20936 1047 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 FLT3LGP49771 235 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 BACE1P56817 501 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 ZNF280AP59817 542 aaPredicted RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 CCNA1P78396 465 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 FSTL1Q12841 308 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 CHURC1Q8WUH1 139 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 CCDC17Q96LX7 622 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 ORC3Q9UBD5 711 aaPredicted RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 CNPY2Q9Y2B0 182 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 MKI67P46013 3256 aaKnown RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 VCAM1P19320 739 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 COG2Q14746 738 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 L3MBTL3Q96JM7 780 aaPredicted RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 SH2D3AQ9BRG2 576 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 ZNF609O15014 1411 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 SBF2Q86WG5 1849 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 MANSC4A6NHS7 340 aaPredicted RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 C6orf222P0C671 652 aaPredicted RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 KIF5BP33176 963 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 GJC2Q5T442 439 aaPredicted RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 FAM117BQ6P1L5 589 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms