RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SESN3P58005 492 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 TRIM68Q6AZZ1 485 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 CCDC13Q8IYE1 715 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 UBN2Q6ZU65 1347 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 RFC1P35251 1148 aaPredicted RBP20.04■□□□□ 0.8
SNX27-202ENST00000368841 LIG4P49917 911 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 BCAMP50895 628 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 NAA35Q5VZE5 725 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 KIF9Q9HAQ2 790 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 KCNK3O14649 394 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 CHMP6Q96FZ7 201 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 TAOK1Q7L7X3 1001 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 KRT25Q7Z3Z0 450 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 LPIN2Q92539 896 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 TRIM35Q9UPQ4 493 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 GOLGA8FQ08AF8 430 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 GOLGA8DPQ0D2H9 430 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 OAS2P29728 719 aaKnown RBP20.04■□□□□ 0.8
SNX27-202ENST00000368841 CLNS1AP54105 237 aaKnown RBP20.04■□□□□ 0.8
SNX27-202ENST00000368841 ADCY1Q08828 1119 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 TSC1Q92574 1164 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 IFIH1Q9BYX4 1025 aaKnown RBP20.04■□□□□ 0.8
SNX27-202ENST00000368841 PANK4Q9NVE7 773 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 USP21Q9UK80 565 aa20.04■□□□□ 0.8
SNX27-202ENST00000368841 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
SNX27-202ENST00000368841 POLA2Q14181 598 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 XKR9Q5GH70 373 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 TTBK2Q6IQ55 1244 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 ARHGAP42A6NI28 874 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 SPICE1Q8N0Z3 855 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 VCX3BQ9H321 246 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 CACYBPQ9HB71 228 aaKnown RBP20.03■□□□□ 0.8
SNX27-202ENST00000368841 ATP1A2P50993 1020 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 MFSD14BQ5SR56 506 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 EFCC1Q9HA90 598 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 RTEL1Q9NZ71 1219 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 RPS6KA2Q15349 733 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 CLIC6Q96NY7 704 aa20.03■□□□□ 0.8
SNX27-202ENST00000368841 INPP5BP32019 993 aa20.02■□□□□ 0.8
SNX27-202ENST00000368841 LLGL1Q15334 1064 aa20.02■□□□□ 0.8
SNX27-202ENST00000368841 BAG2O95816 211 aa20.02■□□□□ 0.8
SNX27-202ENST00000368841 ERO1AQ96HE7 468 aa20.02■□□□□ 0.8
SNX27-202ENST00000368841 FNDC3AQ9Y2H6 1198 aaKnown RBP20.02■□□□□ 0.8
SNX27-202ENST00000368841 INTS4Q96HW7 963 aaKnown RBP20.02■□□□□ 0.8
SNX27-202ENST00000368841 PGBD1Q96JS3 809 aa20.02■□□□□ 0.8
SNX27-202ENST00000368841 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.79
SNX27-202ENST00000368841 CLRN2A0PK11 232 aa20.02■□□□□ 0.79
SNX27-202ENST00000368841 KCNQ3O43525 872 aa20.02■□□□□ 0.79
SNX27-202ENST00000368841 SLC39A2Q9NP94 309 aa20.02■□□□□ 0.79
SNX27-202ENST00000368841 ADCY8P40145 1251 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 REXO1Q8N1G1 1221 aaKnown RBP20.01■□□□□ 0.79
SNX27-202ENST00000368841 RAB20Q9NX57 234 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 TTC30BQ8N4P2 665 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 MAST3O60307 1309 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 PARP10Q53GL7 1025 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 CCDC127Q96BQ5 260 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 KCNJ18B7U540 433 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 PIK3CAP42336 1068 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 KCNJ12Q14500 433 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 CD2APQ9Y5K6 639 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 CSADQ9Y600 493 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 SLC12A1Q13621 1099 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 SPATA17Q96L03 361 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 FAM193BQ96PV7 902 aaPredicted RBP20.01■□□□□ 0.79
SNX27-202ENST00000368841 NUP58Q9BVL2 599 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 KIF3CO14782 793 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 MORC3Q14149 939 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 ZNF653Q96CK0 615 aa20.01■□□□□ 0.79
SNX27-202ENST00000368841 USP17L12C9JPN9 530 aa20■□□□□ 0.79
SNX27-202ENST00000368841 USP17L21D6R901 530 aa20■□□□□ 0.79
SNX27-202ENST00000368841 ME3Q16798 604 aa20■□□□□ 0.79
SNX27-202ENST00000368841 OTUD6AQ7L8S5 288 aa20■□□□□ 0.79
SNX27-202ENST00000368841 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
SNX27-202ENST00000368841 WDR46O15213 610 aaKnown RBP20■□□□□ 0.79
SNX27-202ENST00000368841 CACNB1Q02641 598 aaPredicted RBP20■□□□□ 0.79
SNX27-202ENST00000368841 CYP4A11Q02928 519 aa20■□□□□ 0.79
SNX27-202ENST00000368841 GCKRQ14397 625 aa20■□□□□ 0.79
SNX27-202ENST00000368841 XPO4Q9C0E2 1151 aaKnown RBP20■□□□□ 0.79
SNX27-202ENST00000368841 RASSF4Q9H2L5 321 aa20■□□□□ 0.79
SNX27-202ENST00000368841 FIS1Q9Y3D6 152 aa20■□□□□ 0.79
SNX27-202ENST00000368841 GSTA1P08263 222 aa20■□□□□ 0.79
SNX27-202ENST00000368841 GSTA2P09210 222 aa20■□□□□ 0.79
SNX27-202ENST00000368841 KRT71Q3SY84 523 aa20■□□□□ 0.79
SNX27-202ENST00000368841 DDX25Q9UHL0 483 aaKnown RBP20■□□□□ 0.79
SNX27-202ENST00000368841 CFAP221Q4G0U5 840 aa20■□□□□ 0.79
SNX27-202ENST00000368841 SEC23IPQ9Y6Y8 1000 aaKnown RBP20■□□□□ 0.79
SNX27-202ENST00000368841 ARPP19P56211 112 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
SNX27-202ENST00000368841 NR1I2O75469 434 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 CTSWP56202 376 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 B4GALNT4Q76KP1 1039 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 PSTPIP2Q9H939 334 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 DDX41Q9UJV9 622 aaKnown RBP19.99■□□□□ 0.79
SNX27-202ENST00000368841 FLOT1O75955 427 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 POLR2FP61218 127 aaKnown RBP19.99■□□□□ 0.79
SNX27-202ENST00000368841 RYBPQ8N488 228 aaPredicted RBP19.99■□□□□ 0.79
SNX27-202ENST00000368841 CHAMP1Q96JM3 812 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms