RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MTX1Q13505 466 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 CACNA2D3Q8IZS8 1091 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 DHTKD1Q96HY7 919 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 HMGB1P1B2RPK0 211 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 GCFC2P16383 781 aaKnown RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 CFAP157Q5JU67 520 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 TAF5LO75529 589 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 BIRC3Q13489 604 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 SLC4A8Q2Y0W8 1093 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 GRK7Q8WTQ7 553 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 ZAP70P43403 619 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 BCAP29Q9UHQ4 241 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 MYOCDQ8IZQ8 938 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 FAM71BQ8TC56 605 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 TYW1Q9NV66 732 aaKnown RBP13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 AMFRQ9UKV5 643 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 TSNAXIP1Q2TAA8 658 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 CABP7Q86V35 215 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 HOMER3Q9NSC5 361 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 OR52Z1P0C646 297 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 GPT2Q8TD30 523 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 AGTPBP1Q9UPW5 1226 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 GOLGA8KD6RF30 607 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
CDC42BPA-203ENST00000366766 FGAP02671 866 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 TRPC3Q13507 836 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 POLD1P28340 1107 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CCDC62Q6P9F0 684 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 SRGAP1Q7Z6B7 1085 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 NEK8Q86SG6 692 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CCDC25Q86WR0 208 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CCDC97Q96F63 343 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 ARMCX3Q9UH62 379 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 PDE8BO95263 885 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CABLES1Q8TDN4 633 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 F8W031 263 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 LIFRP42702 1097 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 TCHHQ07283 1943 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 BBOF1Q8ND07 529 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CNGA1P29973 690 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CALR3Q96L12 384 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 VEZTQ9HBM0 779 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 IGSF3O75054 1194 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 PDIA3P30101 505 aaKnown RBP13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 CCDC63Q8NA47 563 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 PPP2R2CQ9Y2T4 447 aa13.29□□□□□ -0.28
CDC42BPA-203ENST00000366766 LRRC7Q96NW7 1537 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 I3L4J1 428 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 KRT5P13647 590 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 TXKP42681 527 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 C8orf37Q96NL8 207 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 KCNK9Q9NPC2 374 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 C2CD5Q86YS7 1000 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 ASPRV1Q53RT3 343 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 KLHDC4Q8TBB5 520 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 RCOR1Q9UKL0 485 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 ERVV-1B6SEH8 477 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 EXOC3O60645 756 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 POLA2Q14181 598 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 AOC3Q16853 763 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 GCNT3O95395 438 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 PNOCQ13519 176 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 CEP57Q86XR8 500 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 THAP12O43422 761 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 IRX4P78413 519 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 HAUS1Q96CS2 278 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 CCDC17Q96LX7 622 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 GMNNO75496 209 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms