RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.38
CTSE-202ENST00000360218 SPZ1Q9BXG8 430 aa12.71□□□□□ -0.38
CTSE-202ENST00000360218 SH3GLB2Q9NR46 395 aa12.71□□□□□ -0.38
CTSE-202ENST00000360218 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.38
CTSE-202ENST00000360218 FRMPD2Q68DX3 1309 aaPredicted RBP12.71□□□□□ -0.38
CTSE-202ENST00000360218 CALML3P27482 149 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 CLCN1P35523 988 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 PNOCQ13519 176 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 METTL16Q86W50 562 aaKnown RBP12.7□□□□□ -0.38
CTSE-202ENST00000360218 DHX40Q8IX18 779 aaKnown RBP12.7□□□□□ -0.38
CTSE-202ENST00000360218 CEP57L1Q8IYX8 460 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
CTSE-202ENST00000360218 MRIQ9BWK5 157 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 FAM13BQ9NYF5 915 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
CTSE-202ENST00000360218 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
CTSE-202ENST00000360218 FAM196BA6NMK8 535 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 FOXN1O15353 648 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 PDHBP11177 359 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 DPEP1P16444 411 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 NLRP12P59046 1061 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 HDLBPQ00341 1268 aaKnown RBP12.69□□□□□ -0.38
CTSE-202ENST00000360218 ISM2Q6H9L7 571 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 HOMER1Q86YM7 354 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 TTLL6Q8N841 843 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 CNNM3Q8NE01 707 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 MORC2Q9Y6X9 1032 aaPredicted RBP12.69□□□□□ -0.38
CTSE-202ENST00000360218 MYO3BQ8WXR4 1341 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 GOLGA6L19H0YKK7 550 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
CTSE-202ENST00000360218 KCNA3P22001 575 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 MSNP26038 577 aaKnown RBP12.69□□□□□ -0.38
CTSE-202ENST00000360218 ZRSR1Q15695 479 aaKnown RBP12.69□□□□□ -0.38
CTSE-202ENST00000360218 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 EHD4Q9H223 541 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 VAT1LQ9HCJ6 419 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 CLIP2Q9UDT6 1046 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 SERTAD1Q9UHV2 236 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 TUBE1Q9UJT0 475 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
CTSE-202ENST00000360218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.69□□□□□ -0.38
CTSE-202ENST00000360218 M0R2N6 131 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 POLR2DO15514 142 aaKnown RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 ZNF75DP51815 510 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 ATP2C1P98194 919 aaPredicted RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 PTGDRQ13258 359 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 SHROOM1Q2M3G4 852 aaPredicted RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 PDILTQ8N807 584 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 CCDC148Q8NFR7 591 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 PIGSQ96S52 555 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 TDRD3Q9H7E2 651 aaKnown RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 PCDHA6Q9UN73 950 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 PCDHA8Q9Y5H6 950 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 TTLL1O95922 423 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 BMP15O95972 392 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 MCM7P33993 719 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 PLA2G4DQ86XP0 818 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 ZNF830Q96NB3 372 aaPredicted RBP12.68□□□□□ -0.38
CTSE-202ENST00000360218 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
CTSE-202ENST00000360218 A0A087X0B3 334 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 BECN2A8MW95 431 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 TRAPPC10P48553 1259 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 NAPAP54920 295 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 ATP2B2Q01814 1243 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
CTSE-202ENST00000360218 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 FERMT2Q96AC1 680 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 EPSTI1Q96J88 318 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 NAT10Q9H0A0 1025 aaKnown RBP12.67□□□□□ -0.38
CTSE-202ENST00000360218 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
CTSE-202ENST00000360218 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
CTSE-202ENST00000360218 VWA3AA6NCI4 1184 aa12.66□□□□□ -0.38
CTSE-202ENST00000360218 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
CTSE-202ENST00000360218 SNHG28P0DPA3 235 aa12.66□□□□□ -0.38
CTSE-202ENST00000360218 MDM2Q00987 491 aaPredicted RBP12.66□□□□□ -0.38
CTSE-202ENST00000360218 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
CTSE-202ENST00000360218 FOXP4Q8IVH2 680 aaPredicted RBP12.66□□□□□ -0.38
CTSE-202ENST00000360218 SYMPKQ92797 1274 aaKnown RBP12.66□□□□□ -0.38
CTSE-202ENST00000360218 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
CTSE-202ENST00000360218 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
CTSE-202ENST00000360218 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
CTSE-202ENST00000360218 CCDC194A0A1B0GVG4 234 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms