RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 CTCFLQ8NI51 663 aaPredicted RBP23.43■■□□□ 1.34
TRIM3-202ENST00000359518 TNFRSF25Q93038 417 aa23.43■■□□□ 1.34
TRIM3-202ENST00000359518 BAZ2AQ9UIF9 1905 aaKnown RBP23.43■■□□□ 1.34
TRIM3-202ENST00000359518 CYP2D6P10635 497 aa23.43■■□□□ 1.34
TRIM3-202ENST00000359518 E2F4Q16254 413 aa23.43■■□□□ 1.34
TRIM3-202ENST00000359518 TMTC1Q8IUR5 882 aa23.43■■□□□ 1.34
TRIM3-202ENST00000359518 GPKOWQ92917 476 aaPredicted RBP eCLIP23.43■■□□□ 1.34
TRIM3-202ENST00000359518 HDAC6Q9UBN7 1215 aa23.43■■□□□ 1.34
TRIM3-202ENST00000359518 PP2D1A8MPX8 630 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 ARHGAP25P42331 645 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 PRCPP42785 496 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 EIF5P55010 431 aaKnown RBP23.42■■□□□ 1.34
TRIM3-202ENST00000359518 TCP11X2Q5H9J9 407 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 CTR9Q6PD62 1173 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 TXLNBQ8N3L3 684 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 ZNF384Q8TF68 577 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 TTF2Q9UNY4 1162 aaKnown RBP23.42■■□□□ 1.34
TRIM3-202ENST00000359518 CTAGE15A4D2H0 777 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 CTAGE8P0CG41 777 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 RCAN1P53805 252 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 PDXDC2PQ6P474 469 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 CTAGE6Q86UF2 777 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 CTAGE4Q8IX94 777 aa23.42■■□□□ 1.34
TRIM3-202ENST00000359518 EXOC5O00471 708 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 ATP6V1AP38606 617 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 CNTNAP5Q8WYK1 1306 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 MAP2K7O14733 419 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 CAPN2P17655 700 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 CRKLP46109 303 aaKnown RBP23.41■■□□□ 1.34
TRIM3-202ENST00000359518 ZSCAN26Q16670 478 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 CYP26C1Q6V0L0 522 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 C3orf67Q6ZVT6 689 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 MTA3Q9BTC8 594 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 LIMA1Q9UHB6 759 aaKnown RBP23.41■■□□□ 1.34
TRIM3-202ENST00000359518 ANAPC4Q9UJX5 808 aa23.41■■□□□ 1.34
TRIM3-202ENST00000359518 BMP15O95972 392 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 RPN1P04843 607 aaKnown RBP23.4■■□□□ 1.34
TRIM3-202ENST00000359518 RAD51AP2Q09MP3 1159 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 INTS5Q6P9B9 1019 aaKnown RBP23.4■■□□□ 1.34
TRIM3-202ENST00000359518 ANKRD20A12PQ8NF67 263 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 RBM28Q9NW13 759 aaKnown RBP23.4■■□□□ 1.34
TRIM3-202ENST00000359518 PMS1P54277 932 aaKnown RBP23.4■■□□□ 1.34
TRIM3-202ENST00000359518 PPP2R5BQ15173 497 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 HDXQ7Z353 690 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 CCDC102AQ96A19 550 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 RWDD2AQ9UIY3 292 aa23.4■■□□□ 1.34
TRIM3-202ENST00000359518 TTC26A0AVF1 554 aa23.39■■□□□ 1.34
TRIM3-202ENST00000359518 SCG2P13521 617 aa23.39■■□□□ 1.34
TRIM3-202ENST00000359518 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.34
TRIM3-202ENST00000359518 HINFPQ9BQA5 517 aa23.39■■□□□ 1.34
TRIM3-202ENST00000359518 TMEM51Q9NW97 253 aa23.39■■□□□ 1.34
TRIM3-202ENST00000359518 TIAM2Q8IVF5 1701 aa23.39■■□□□ 1.33
TRIM3-202ENST00000359518 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.39■■□□□ 1.33
TRIM3-202ENST00000359518 GTPBP6O43824 516 aaPredicted RBP23.39■■□□□ 1.33
TRIM3-202ENST00000359518 SRGAP2O75044 1071 aa23.39■■□□□ 1.33
TRIM3-202ENST00000359518 KLRK1P26718 216 aa23.39■■□□□ 1.33
TRIM3-202ENST00000359518 STAT6P42226 847 aa23.39■■□□□ 1.33
TRIM3-202ENST00000359518 GDAP1L1Q96MZ0 367 aa23.39■■□□□ 1.33
TRIM3-202ENST00000359518 SEMA3EO15041 775 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 SMIM5Q71RC9 77 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 CAPZA3Q96KX2 299 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 CCDC87Q9NVE4 849 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 GNL3LQ9NVN8 582 aaKnown RBP23.38■■□□□ 1.33
TRIM3-202ENST00000359518 FAN1Q9Y2M0 1017 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 EPN1Q9Y6I3 576 aaPredicted RBP23.38■■□□□ 1.33
TRIM3-202ENST00000359518 CT47A1Q5JQC4 288 aaPredicted RBP23.38■■□□□ 1.33
TRIM3-202ENST00000359518 CCDC51Q96ER9 411 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 MYO6Q9UM54 1294 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 L1RE1Q9UN81 338 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 REXO2Q9Y3B8 237 aaKnown RBP23.38■■□□□ 1.33
TRIM3-202ENST00000359518 ERLIN1O75477 346 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 AK7Q96M32 723 aa23.38■■□□□ 1.33
TRIM3-202ENST00000359518 NTSR2O95665 410 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 PARP1P09874 1014 aaKnown RBP23.37■■□□□ 1.33
TRIM3-202ENST00000359518 ZNF658Q5TYW1 1059 aaPredicted RBP23.37■■□□□ 1.33
TRIM3-202ENST00000359518 GPIHBP1Q8IV16 184 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 ITIH6Q6UXX5 1313 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 FAM205AQ6ZU69 1335 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 ITGB4P16144 1822 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 CAMTA2O94983 1202 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 IRF2BP1Q8IU81 584 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 MSANTD4Q8NCY6 345 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 RAB21Q9UL25 225 aa23.37■■□□□ 1.33
TRIM3-202ENST00000359518 COL1A1P02452 1464 aaPredicted RBP23.36■■□□□ 1.33
TRIM3-202ENST00000359518 LRRC10BA6NIK2 292 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 TSPY2A6NKD2 308 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 ZMYND10O75800 440 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 NDUFA10O95299 355 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 DOCK2Q92608 1830 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 CALM1P0DP23 149 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 CALM2P0DP24 149 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 CALM3P0DP25 149 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 CASP8Q14790 479 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 CAVIN4Q5BKX8 364 aa23.36■■□□□ 1.33
TRIM3-202ENST00000359518 ANKRD18AQ8IVF6 992 aa23.35■■□□□ 1.33
TRIM3-202ENST00000359518 CCDC24Q8N4L8 307 aa23.35■■□□□ 1.33
TRIM3-202ENST00000359518 COL4A1P02462 1669 aa23.35■■□□□ 1.33
TRIM3-202ENST00000359518 VGLL3A8MV65 326 aa23.35■■□□□ 1.33
TRIM3-202ENST00000359518 SPAG1Q07617 926 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms