RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RGPD1P0DJD0 1748 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GOLGA6CA6NDK9 693 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 PP2D1A8MPX8 630 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ATP2C2O75185 946 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 RPN1P04843 607 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GYPCP04921 128 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GOLGA6DP0CG33 693 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GNAT2P19087 354 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 LIG3P49916 1009 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 MNAT1P51948 309 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 SLC7A5Q01650 507 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 CKAP4Q07065 602 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 NTRK3Q16288 839 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 LETM2Q2VYF4 491 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 FOXR1Q6PIV2 292 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GIGYF2Q6Y7W6 1299 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 IPO4Q8TEX9 1081 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 FERMT2Q96AC1 680 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GSDMAQ96QA5 445 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ABHD10Q9NUJ1 306 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 TCP11L1Q9NUJ3 509 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GOLGA6AQ9NYA3 693 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 RIPOR2Q9Y4F9 1068 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 JCADQ9P266 1359 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 A0A1B0GTH6 734 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 GOLGA6BA6NDN3 693 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ACTN4O43707 911 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 NDUFA10O95299 355 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 BMP15O95972 392 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 PARP1P09874 1014 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 CCT5P48643 541 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ODF2Q5BJF6 829 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 SOGA3Q5TF21 947 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ZSCAN10Q96SZ4 725 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 FAM217BQ9NTX9 383 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 MCM9Q9NXL9 1143 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ADD3Q9UEY8 706 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 SLIT1O75093 1534 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ERVV-2B6SEH9 535 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ZNF185O15231 689 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 MCM3P25205 808 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 CCDC152Q4G0S7 254 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 EARS2Q5JPH6 523 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 KCTD16Q68DU8 428 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 MAATS1Q7Z4T9 603 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 KIFC2Q96AC6 838 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 NWD1Q149M9 1564 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 MAP3K15Q6ZN16 1313 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 A0A087X0B3 334 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 TTC26A0AVF1 554 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 EBAG9O00559 213 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 TACC1O75410 805 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 INF2Q27J81 1249 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 RSRC2Q7L4I2 434 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 DYMQ7RTS9 669 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 SGMS1Q86VZ5 419 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 DZIP1Q86YF9 867 aaKnown RBP7.37□□□□□ -1.23
CSDE1-203ENST00000358528 C2CD5Q86YS7 1000 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 TMEM139Q8IV31 216 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 FAM71BQ8TC56 605 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 ANKZF1Q9H8Y5 726 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 SAMM50Q9Y512 469 aa7.37□□□□□ -1.23
CSDE1-203ENST00000358528 MEGF6O75095 1541 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 ATP1A1P05023 1023 aaKnown RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 KRT18P05783 430 aaKnown RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 GOLGA8HP0CJ92 632 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 PRCPP42785 496 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 SAMD1Q6SPF0 538 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 SMCR8Q8TEV9 937 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 BUB1O43683 1085 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 KIF5BP33176 963 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 ERVK-24P63145 666 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 E2F4Q16254 413 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 TCP11X2Q5H9J9 407 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 BEND6Q5SZJ8 279 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 SECISBP2LQ93073 1101 aaKnown RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 NLRC4Q9NPP4 1024 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 HSF2BPO75031 334 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 ZNF18P17022 549 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 TBX2Q13207 712 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 LRP10Q7Z4F1 713 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 SRLQ86TD4 932 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 CADPS2Q86UW7 1296 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 EHBP1Q8NDI1 1231 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 BCAS4Q8TDM0 211 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 PIGBQ92521 554 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 CCDC51Q96ER9 411 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 ALS2CR12Q96Q35 445 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 MMS19Q96T76 1030 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 RNF26Q9BY78 433 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-203ENST00000358528 CPVLQ9H3G5 476 aa7.36□□□□□ -1.23
CSDE1-203ENST00000358528 GTPBP6O43824 516 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-203ENST00000358528 GUCY2FP51841 1108 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 CCDC40Q4G0X9 1142 aa7.35□□□□□ -1.23
CSDE1-203ENST00000358528 KRT26Q7Z3Y9 468 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms