RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
CCNE1-202ENST00000357943 NAP1L2Q9ULW6 460 aaPredicted RBP17.38■□□□□ 0.37
CCNE1-202ENST00000357943 FRMPD2Q68DX3 1309 aaPredicted RBP17.37■□□□□ 0.37
CCNE1-202ENST00000357943 BTBD19C9JJ37 291 aa17.37■□□□□ 0.37
CCNE1-202ENST00000357943 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
CCNE1-202ENST00000357943 ST18O60284 1047 aa17.37■□□□□ 0.37
CCNE1-202ENST00000357943 DDAH1O94760 285 aa17.37■□□□□ 0.37
CCNE1-202ENST00000357943 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
CCNE1-202ENST00000357943 CCDC144CPQ8IYA2 1237 aa17.37■□□□□ 0.37
CCNE1-202ENST00000357943 RPAP3Q9H6T3 665 aaPredicted RBP17.37■□□□□ 0.37
CCNE1-202ENST00000357943 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
CCNE1-202ENST00000357943 ZBTB43O43298 467 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 BMP3P12645 472 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 PDIA3P30101 505 aaKnown RBP17.36■□□□□ 0.37
CCNE1-202ENST00000357943 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 SYNE3Q6ZMZ3 975 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 STAG2Q8N3U4 1231 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 DCAF4Q8WV16 495 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 ISY1Q9ULR0 285 aaKnown RBP17.36■□□□□ 0.37
CCNE1-202ENST00000357943 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 GOLGA8BA8MQT2 603 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 IGF2BP3O00425 579 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCNE1-202ENST00000357943 ZNF543Q08ER8 600 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 ZNF274Q96GC6 653 aaPredicted RBP17.36■□□□□ 0.37
CCNE1-202ENST00000357943 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 MAD2L2Q9UI95 211 aa17.36■□□□□ 0.37
CCNE1-202ENST00000357943 LARGE1O95461 756 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
CCNE1-202ENST00000357943 INHBEP58166 350 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 STK3Q13188 491 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 GRM4Q14833 912 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 ME3Q16798 604 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 TTBK2Q6IQ55 1244 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 FANCBQ8NB91 859 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 MAP3K14Q99558 947 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 FBXO28Q9NVF7 368 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 LOC285556D6RIA3 1793 aa17.35■□□□□ 0.37
CCNE1-202ENST00000357943 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L15C9J2P7 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L13C9JLJ4 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 TMEM232C9JQI7 657 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L11C9JVI0 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L18D6R9N7 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L22D6RA61 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L17D6RBQ6 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L19D6RCP7 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L20D6RJB6 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CALM1P0DP23 149 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CALM2P0DP24 149 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CALM3P0DP25 149 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 HOXA7P31268 230 aaPredicted RBP17.34■□□□□ 0.37
CCNE1-202ENST00000357943 TM4SF4P48230 202 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 METAP2P50579 478 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
CCNE1-202ENST00000357943 USP17L24Q0WX57 530 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CATSPERGQ6ZRH7 1159 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 ANKRD23Q86SG2 305 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CTCFLQ8NI51 663 aaPredicted RBP17.34■□□□□ 0.37
CCNE1-202ENST00000357943 CPVLQ9H3G5 476 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
CCNE1-202ENST00000357943 GOLGA8AA7E2F4 631 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 PDHXO00330 501 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 CDC27P30260 824 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 SLC16A2P36021 539 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 MAP2K2P36507 400 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 RCAN1P53805 252 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 ASPRV1Q53RT3 343 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 GPATCH4Q5T3I0 446 aaKnown RBP17.33■□□□□ 0.37
CCNE1-202ENST00000357943 IFNL1Q8IU54 200 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 IL27Q8NEV9 243 aa17.33■□□□□ 0.37
CCNE1-202ENST00000357943 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.37
CCNE1-202ENST00000357943 FLOT1O75955 427 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 ADD1P35611 737 aaKnown RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 STAT2P52630 851 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 RTN1Q16799 776 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 NBPF11Q86T75 865 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 CMTR1Q8N1G2 835 aaKnown RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 UBA5Q9GZZ9 404 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 ASCC2Q9H1I8 757 aaPredicted RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 NCOA5Q9HCD5 579 aaKnown RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 FEM1BQ9UK73 627 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 PLEKHA8P1O95397 391 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 CYP2C8P10632 490 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 KIF5BP33176 963 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 SCRN1Q12765 414 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 IKQ13123 557 aaPredicted RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.364e-7■■■■□ 23.4
CCNE1-202ENST00000357943 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 NECAB1Q8N987 351 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
CCNE1-202ENST00000357943 SLC45A1Q9Y2W3 748 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 NID2Q14112 1375 aa17.32■□□□□ 0.36
CCNE1-202ENST00000357943 PFKFB2O60825 505 aa17.31■□□□□ 0.36
CCNE1-202ENST00000357943 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms