RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 ATG4CQ96DT6 458 aa20.36■□□□□ 0.85
NCL-202ENST00000356936 MOV10L1Q9BXT6 1211 aaKnown RBP20.36■□□□□ 0.85
NCL-202ENST00000356936 MROH8Q9H579 483 aa20.36■□□□□ 0.85
NCL-202ENST00000356936 ADAMTS5Q9UNA0 930 aa20.36■□□□□ 0.85
NCL-202ENST00000356936 ORC4O43929 436 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 NDUFB10O96000 172 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 PCP11498 1178 aaKnown RBP20.35■□□□□ 0.85
NCL-202ENST00000356936 ZKSCAN1P17029 563 aaPredicted RBP20.35■□□□□ 0.85
NCL-202ENST00000356936 PTPREP23469 700 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 PDE4AP27815 886 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 MAP2K5Q13163 448 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 PLS1Q14651 629 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 GMCL1P1Q8NEA9 526 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 PPP1R9AQ9ULJ8 1098 aa20.35■□□□□ 0.85
NCL-202ENST00000356936 RPTORQ8N122 1335 aa20.34■□□□□ 0.85
NCL-202ENST00000356936 RANBP6O60518 1105 aaKnown RBP20.34■□□□□ 0.85
NCL-202ENST00000356936 SLC25A27O95847 323 aa20.34■□□□□ 0.85
NCL-202ENST00000356936 FGRP09769 529 aa20.34■□□□□ 0.85
NCL-202ENST00000356936 U2AF1L4Q8WU68 220 aaKnown RBP20.34■□□□□ 0.85
NCL-202ENST00000356936 TRIB2Q92519 343 aa20.34■□□□□ 0.85
NCL-202ENST00000356936 SLF1Q9BQI6 1058 aa20.34■□□□□ 0.85
NCL-202ENST00000356936 HMX1Q9NP08 348 aaPredicted RBP20.34■□□□□ 0.85
NCL-202ENST00000356936 PAK6Q9NQU5 681 aaPredicted RBP20.34■□□□□ 0.85
NCL-202ENST00000356936 A0A0G2JMZ2 1700 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 VWA5AO00534 786 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 SGPL1O95470 568 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 ERCC3P19447 782 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 COPB2P35606 906 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 GRB14Q14449 540 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 PRPF38AQ8NAV1 312 aaKnown RBP20.33■□□□□ 0.85
NCL-202ENST00000356936 RNF41Q9H4P4 317 aaPredicted RBP20.33■□□□□ 0.85
NCL-202ENST00000356936 TOMM22Q9NS69 142 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 FBXO28Q9NVF7 368 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 STX8Q9UNK0 236 aa20.33■□□□□ 0.85
NCL-202ENST00000356936 NT5C2P49902 561 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 TMEM132BQ14DG7 1078 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 NCAPG2Q86XI2 1143 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 ABRAQ8N0Z2 381 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 LRRC47Q8N1G4 583 aaKnown RBP20.32■□□□□ 0.84
NCL-202ENST00000356936 NUP88Q99567 741 aaPredicted RBP20.32■□□□□ 0.84
NCL-202ENST00000356936 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.32■□□□□ 0.841e-5■■■□□ 18
NCL-202ENST00000356936 SLC5A4Q9NY91 659 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 FEM1BQ9UK73 627 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 PLXNB2O15031 1838 aa20.32■□□□□ 0.84
NCL-202ENST00000356936 ZNF213O14771 459 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 TFRCP02786 760 aaKnown RBP20.31■□□□□ 0.84
NCL-202ENST00000356936 HOXC6P09630 235 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 MAP3K21Q5TCX8 1036 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 SLFN13Q68D06 897 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 MFSD6Q6ZSS7 791 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 DPP9Q86TI2 863 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 DEFB118Q96PH6 123 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 INCENPQ9NQS7 918 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 CTDP1Q9Y5B0 961 aaPredicted RBP20.31■□□□□ 0.84
NCL-202ENST00000356936 RLFQ13129 1914 aa20.31■□□□□ 0.84
NCL-202ENST00000356936 PRKAR2AP13861 404 aaKnown RBP20.3■□□□□ 0.84
NCL-202ENST00000356936 GSPT1P15170 499 aaKnown RBP20.3■□□□□ 0.84
NCL-202ENST00000356936 STAT3P40763 770 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 RRP12Q5JTH9 1297 aaKnown RBP20.3■□□□□ 0.84
NCL-202ENST00000356936 AKNAD1Q5T1N1 836 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 STAG1Q8WVM7 1258 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 RUFY2Q8WXA3 655 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 GMCL1Q96IK5 515 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 IL17RBQ9NRM6 502 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 CTNNA3Q9UI47 895 aa20.3■□□□□ 0.84
NCL-202ENST00000356936 DOCK3Q8IZD9 2030 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 ZBED4O75132 1171 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 FCER1AP12319 257 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 BMP3P12645 472 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 ADORA2AP29274 412 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 SLC1A4P43007 532 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 HAND2P61296 217 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 TRIM32Q13049 653 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 TEX13BQ9BXU2 312 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 TCP11L1Q9NUJ3 509 aa20.29■□□□□ 0.84
NCL-202ENST00000356936 RAD50Q92878 1312 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 FDX1P10109 184 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 NOVP48745 357 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
NCL-202ENST00000356936 CCL14Q16627 93 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 PRPF38BQ5VTL8 546 aaKnown RBP20.28■□□□□ 0.84
NCL-202ENST00000356936 REPS2Q8NFH8 660 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 CHURC1Q8WUH1 139 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 KIFC2Q96AC6 838 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 CRISPLD2Q9H0B8 497 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 ZNF214Q9UL59 606 aaPredicted RBP20.28■□□□□ 0.84
NCL-202ENST00000356936 ISY1Q9ULR0 285 aaKnown RBP20.28■□□□□ 0.84
NCL-202ENST00000356936 TACC3Q9Y6A5 838 aa20.28■□□□□ 0.84
NCL-202ENST00000356936 BRCA2P51587 3418 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 ATP2A1O14983 1001 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 NMT2O60551 498 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
NCL-202ENST00000356936 STAT2P52630 851 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 IMMTQ16891 758 aaKnown RBP20.27■□□□□ 0.84
NCL-202ENST00000356936 FAM160B2Q86V87 743 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms