RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 POLD1P28340 1107 aa12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 TMTC4Q5T4D3 741 aa12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 SCYL3Q8IZE3 742 aa12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 SCOCQ9UIL1 159 aa12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 KMT5BQ4FZB7 885 aa12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 RSBN1LQ6PCB5 846 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
GTF3C1-201ENST00000356183 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 EEF1B2P24534 225 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 CABP7Q86V35 215 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ATF2P15336 505 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SNX29Q8TEQ0 813 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 CCDC138Q96M89 665 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SYF2O95926 243 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 HAUS3Q68CZ6 603 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 TRIM58Q8NG06 486 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ACSBG1Q96GR2 724 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 CEP19Q96LK0 163 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SUN1O94901 812 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 CALCRLQ16602 461 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 LRRC8AQ8IWT6 810 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ORC6Q9Y5N6 252 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ECE1P42892 770 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ARHGAP4P98171 946 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 MORC3Q14149 939 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 NAA35Q5VZE5 725 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 EXOC3O60645 756 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ZMYND10O75800 440 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 TESK2Q96S53 571 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 ADGRL1O94910 1474 aa12.11□□□□□ -0.47
GTF3C1-201ENST00000356183 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 STAM2O75886 525 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 CD19P15391 556 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 GDAP1Q8TB36 358 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 FBXO41Q8TF61 875 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 FIS1Q9Y3D6 152 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 GUCY2DQ02846 1103 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 USH1GQ495M9 461 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 GPATCH8Q9UKJ3 1502 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 ZKSCAN8Q15776 578 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 RAPH1Q70E73 1250 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 KRT82Q9NSB4 513 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 B4DLN1 442 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 ETF1P62495 437 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 ESRRGP62508 458 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 IDI1Q13907 227 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
GTF3C1-201ENST00000356183 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 RIOK1Q9BRS2 568 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 LDHBP07195 334 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 C4orf50Q6ZRC1 276 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 CEP70Q8NHQ1 597 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 CHMP6Q96FZ7 201 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 MED10Q9BTT4 135 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 INTS9Q9NV88 658 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 SCINQ9Y6U3 715 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 hCG_1642624A0A1W2PR95 340 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 GSTA4O15217 222 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 COBLO75128 1261 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 BIRC2Q13490 618 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 PKP1Q13835 747 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 KSR2Q6VAB6 950 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 GINS2Q9Y248 185 aa12.09□□□□□ -0.47
GTF3C1-201ENST00000356183 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms