RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TNNC2P02585 160 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 PHKBQ93100 1093 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 POLGP54098 1239 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-201ENST00000356083 ESYT1Q9BSJ8 1104 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 PTPN22Q9Y2R2 807 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 LONRF2Q1L5Z9 754 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 F13A1P00488 732 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 PPP1R16BQ96T49 567 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 MAPKAPK5Q8IW41 473 aa18.95■□□□□ 0.62
COL27A1-201ENST00000356083 KLHL30Q0D2K2 578 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 SULF1Q8IWU6 871 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 HAUS1Q96CS2 278 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 ZSCAN32Q9NX65 697 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 NCKAP5LQ9HCH0 1330 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 GIGYF1O75420 1035 aaPredicted RBP18.94■□□□□ 0.62
COL27A1-201ENST00000356083 UHMK1Q8TAS1 419 aaKnown RBP18.94■□□□□ 0.62
COL27A1-201ENST00000356083 ELP1O95163 1332 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 PIK3CAP42336 1068 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 AK2P54819 239 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 STX2P32856 288 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 MMTAG2Q9BU76 263 aaKnown RBP18.94■□□□□ 0.62
COL27A1-201ENST00000356083 ADCY8P40145 1251 aa18.94■□□□□ 0.62
COL27A1-201ENST00000356083 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
COL27A1-201ENST00000356083 TSPOAP1O95153 1857 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 GSTA4O15217 222 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 CTDSPL2Q05D32 466 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 A0A1B0GUA9 196 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 A6NJR5 290 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 INPP5BP32019 993 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 PHBP35232 272 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
COL27A1-201ENST00000356083 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 CCDC141Q6ZP82 1450 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 H7C0C1 242 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 ATP5OP48047 213 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 PDCD2Q16342 344 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-201ENST00000356083 TROVE2P10155 538 aaKnown RBP eCLIP18.93■□□□□ 0.624e-8■□□□□ 11.2
COL27A1-201ENST00000356083 ZNF594Q96JF6 807 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-201ENST00000356083 FAM207AQ9NSI2 230 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-201ENST00000356083 GCNAQ96QF7 691 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 HINFPQ9BQA5 517 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 MYL10Q9BUA6 226 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 RRAGAQ7L523 313 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
COL27A1-201ENST00000356083 TLR3O15455 904 aaKnown RBP18.92■□□□□ 0.62
COL27A1-201ENST00000356083 ITGA6P23229 1130 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 PAK1Q13153 545 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 ZBTB8OSQ8IWT0 167 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 BLZF1Q9H2G9 400 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 RTEL1Q9NZ71 1219 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 KIAA1107Q9UPP5 1409 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 UBN2Q6ZU65 1347 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 EEF1B2P24534 225 aaKnown RBP18.92■□□□□ 0.62
COL27A1-201ENST00000356083 KRT71Q3SY84 523 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 ARHGEF1Q92888 912 aaKnown RBP18.92■□□□□ 0.62
COL27A1-201ENST00000356083 COG4Q9H9E3 785 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 RAB20Q9NX57 234 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 HESX1Q9UBX0 185 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 PARP2Q9UGN5 583 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 BCAP29Q9UHQ4 241 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 RAP1GDS1P52306 607 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 RCN2Q14257 317 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 CCDC127Q96BQ5 260 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 MYH10P35580 1976 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 RPS6KA1Q15418 735 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 RSBN1LQ6PCB5 846 aaPredicted RBP18.92■□□□□ 0.62
COL27A1-201ENST00000356083 DHX32Q7L7V1 743 aaKnown RBP18.92■□□□□ 0.62
COL27A1-201ENST00000356083 C7orf31Q8N865 590 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 CCDC138Q96M89 665 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 IGF1RP08069 1367 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 CCPG1Q9ULG6 757 aa18.92■□□□□ 0.62
COL27A1-201ENST00000356083 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
COL27A1-201ENST00000356083 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 GOLGA8CPA6NN73 597 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 TTC4O95801 387 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 RGS16O15492 202 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-201ENST00000356083 TMCO5AQ8N6Q1 288 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 NCOA5Q9HCD5 579 aaKnown RBP18.91■□□□□ 0.62
COL27A1-201ENST00000356083 SGK1O00141 431 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 CPA1P15085 419 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 XKR9Q5GH70 373 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 CABS1Q96KC9 395 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 U2AF2P26368 475 aaKnown RBP eCLIP18.91■□□□□ 0.621e-8■■□□□ 12.9
COL27A1-201ENST00000356083 RASSF2P50749 326 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 ANO4Q32M45 955 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 GNPTABQ3T906 1256 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 RINT1Q6NUQ1 792 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 NEUROG2Q9H2A3 272 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 FLOT1O75955 427 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 YWHAEP62258 255 aaKnown RBP18.91■□□□□ 0.62
COL27A1-201ENST00000356083 HMGB1P1B2RPK0 211 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-201ENST00000356083 ADCY7P51828 1080 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 PDE1AP54750 535 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 HADHQ16836 314 aaKnown RBP18.91■□□□□ 0.62
COL27A1-201ENST00000356083 KSR2Q6VAB6 950 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 NDUFB9Q9Y6M9 179 aa18.91■□□□□ 0.62
COL27A1-201ENST00000356083 DMP1Q13316 513 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 PUM3Q15397 648 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 DOK7Q18PE1 504 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms