RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 JADE2Q9NQC1 790 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 LUC7L2Q9Y383 392 aaKnown RBP17.13■□□□□ 0.33
VAT1-201ENST00000355653 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 MRPS25P82663 173 aaKnown RBP17.13■□□□□ 0.33
VAT1-201ENST00000355653 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 RWDD2AQ9UIY3 292 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 A0A087WUV0 522 aaPredicted RBP17.12■□□□□ 0.33
VAT1-201ENST00000355653 AGPSO00116 658 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 EXOC5O00471 708 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 XBP1P17861 261 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
VAT1-201ENST00000355653 AKAP11Q9UKA4 1901 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 MACROD2A1Z1Q3 448 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 ERLIN2O94905 339 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 EIF5P55010 431 aaKnown RBP17.12■□□□□ 0.33
VAT1-201ENST00000355653 PTGDRQ13258 359 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 LRRC10BA6NIK2 292 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 GSG1L2A8MUP6 293 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 CKAP4Q07065 602 aaKnown RBP17.12■□□□□ 0.33
VAT1-201ENST00000355653 FERMT2Q96AC1 680 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 EEF2KMTQ96G04 330 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 SLC4A4Q9Y6R1 1079 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 PKD1L3Q7Z443 1732 aa17.12■□□□□ 0.33
VAT1-201ENST00000355653 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 PDE2AO00408 941 aaPredicted RBP17.11■□□□□ 0.33
VAT1-201ENST00000355653 EBAG9O00559 213 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 IRAK1P51617 712 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 BCAS4Q8TDM0 211 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 DUSP10Q9Y6W6 482 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 FAM169AQ9Y6X4 670 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 TARSL2A2RTX5 802 aaKnown RBP17.11■□□□□ 0.33
VAT1-201ENST00000355653 SNAP23O00161 211 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 IDEP14735 1019 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
VAT1-201ENST00000355653 ALX1Q15699 326 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 CCNI2Q6ZMN8 369 aaPredicted RBP17.11■□□□□ 0.33
VAT1-201ENST00000355653 SND1Q7KZF4 910 aaKnown RBP eCLIP17.11■□□□□ 0.33
VAT1-201ENST00000355653 MIGA1Q8NAN2 632 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
VAT1-201ENST00000355653 GLI3P10071 1580 aa17.11■□□□□ 0.33
VAT1-201ENST00000355653 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
VAT1-201ENST00000355653 PCCAP05165 728 aaPredicted RBP17.1■□□□□ 0.33
VAT1-201ENST00000355653 CSF1RP07333 972 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 PARP1P09874 1014 aaKnown RBP17.1■□□□□ 0.33
VAT1-201ENST00000355653 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.33
VAT1-201ENST00000355653 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 PAPD7Q5XG87 772 aaKnown RBP17.1■□□□□ 0.33
VAT1-201ENST00000355653 MMS22LQ6ZRQ5 1243 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 MTRQ99707 1265 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 LACRTQ9GZZ8 138 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 ANKRD18BA2A2Z9 1011 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 RCCD1A6NED2 376 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 KRT86O43790 486 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 PRCPP42785 496 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 MAP3K12Q12852 859 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
VAT1-201ENST00000355653 KAT2BQ92831 832 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 RRP36Q96EU6 259 aaKnown RBP17.1■□□□□ 0.33
VAT1-201ENST00000355653 CAPS2Q9BXY5 557 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
VAT1-201ENST00000355653 COL18A1P39060 1754 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 GNGT1P63211 74 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 MB21D1Q8N884 522 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 FAM107BQ9H098 131 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 SHOX2O60902 331 aaPredicted RBP17.09■□□□□ 0.33
VAT1-201ENST00000355653 PDE8BO95263 885 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 IPO7O95373 1038 aaKnown RBP17.09■□□□□ 0.33
VAT1-201ENST00000355653 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 CPP00450 1065 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
VAT1-201ENST00000355653 PKN1Q16512 942 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 FBXW10Q5XX13 1052 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 RNF26Q9BY78 433 aaPredicted RBP17.09■□□□□ 0.33
VAT1-201ENST00000355653 GEMIN8Q9NWZ8 242 aaKnown RBP17.09■□□□□ 0.33
VAT1-201ENST00000355653 TNKSO95271 1327 aa17.09■□□□□ 0.33
VAT1-201ENST00000355653 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.33
VAT1-201ENST00000355653 MCM7P33993 719 aa17.08■□□□□ 0.33
VAT1-201ENST00000355653 KRT83P78385 493 aa17.08■□□□□ 0.33
VAT1-201ENST00000355653 PPARAQ07869 468 aa17.08■□□□□ 0.33
VAT1-201ENST00000355653 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.33
VAT1-201ENST00000355653 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms