RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ORC4O43929 436 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 PAK1Q13153 545 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 UBE4AQ14139 1066 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 HNRNPLLQ8WVV9 542 aaKnown RBP27.73■■■□□ 2.03
CPNE1-202ENST00000352393 RAB21Q9UL25 225 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 CTAGE9A4FU28 777 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 POTEB2H3BUK9 544 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 N4BP3O15049 544 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 COBLO75128 1261 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 SCG2P13521 617 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 TRIM14Q14142 442 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 SLC35F6Q8N357 371 aa27.73■■■□□ 2.03
CPNE1-202ENST00000352393 CTCFLQ8NI51 663 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-202ENST00000352393 PUF60Q9UHX1 559 aaKnown RBP27.73■■■□□ 2.03
CPNE1-202ENST00000352393 USP5P45974 858 aa27.72■■■□□ 2.03
CPNE1-202ENST00000352393 PIK3AP1Q6ZUJ8 805 aa27.72■■■□□ 2.03
CPNE1-202ENST00000352393 COL16A1Q07092 1604 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-202ENST00000352393 ROBO1Q9Y6N7 1651 aa27.72■■■□□ 2.03
CPNE1-202ENST00000352393 ARHGAP25P42331 645 aa27.71■■■□□ 2.03
CPNE1-202ENST00000352393 ZNF658Q5TYW1 1059 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-202ENST00000352393 MAST2Q6P0Q8 1798 aa27.71■■■□□ 2.03
CPNE1-202ENST00000352393 WTIPA6NIX2 430 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-202ENST00000352393 RNF225M0QZC1 329 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-202ENST00000352393 KIF4BQ2VIQ3 1234 aa27.71■■■□□ 2.03
CPNE1-202ENST00000352393 TCP11X2Q5H9J9 407 aa27.71■■■□□ 2.03
CPNE1-202ENST00000352393 ZCCHC17Q9NP64 241 aaKnown RBP27.71■■■□□ 2.03
CPNE1-202ENST00000352393 TAB2Q9NYJ8 693 aa27.71■■■□□ 2.03
CPNE1-202ENST00000352393 USP17L12C9JPN9 530 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 USP17L21D6R901 530 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 TUBB4BP68371 445 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 PFKFB3Q16875 520 aaPredicted RBP27.7■■■□□ 2.03
CPNE1-202ENST00000352393 CYP26C1Q6V0L0 522 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 NELFBQ8WX92 580 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 RMND1Q9NWS8 449 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 MYO1AQ9UBC5 1043 aa27.7■■■□□ 2.03
CPNE1-202ENST00000352393 BAZ2BQ9UIF8 2168 aaKnown RBP27.7■■■□□ 2.03
CPNE1-202ENST00000352393 KCNJ18B7U540 433 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 CDC25AP30304 524 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 ATP6V1AP38606 617 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 NLRP5P59047 1200 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 ST5P78524 1137 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 KCNJ12Q14500 433 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 VPS16Q9H269 839 aa27.7■■■□□ 2.02
CPNE1-202ENST00000352393 ADAMTS3O15072 1205 aa27.69■■■□□ 2.02
CPNE1-202ENST00000352393 NMT2O60551 498 aa27.69■■■□□ 2.02
CPNE1-202ENST00000352393 MCM7P33993 719 aa27.69■■■□□ 2.02
CPNE1-202ENST00000352393 EVX2Q03828 476 aa27.69■■■□□ 2.02
CPNE1-202ENST00000352393 ANKRD18AQ8IVF6 992 aa27.69■■■□□ 2.02
CPNE1-202ENST00000352393 PNKPQ96T60 521 aa27.69■■■□□ 2.02
CPNE1-202ENST00000352393 NAPGQ99747 312 aaPredicted RBP27.69■■■□□ 2.02
CPNE1-202ENST00000352393 ABL1P00519 1130 aa27.68■■■□□ 2.02
CPNE1-202ENST00000352393 RPN1P04843 607 aaKnown RBP27.68■■■□□ 2.02
CPNE1-202ENST00000352393 ITPK1Q13572 414 aa27.68■■■□□ 2.02
CPNE1-202ENST00000352393 BEND6Q5SZJ8 279 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-202ENST00000352393 ARL6IP4Q66PJ3 421 aaKnown RBP27.68■■■□□ 2.02
CPNE1-202ENST00000352393 ANKRD20A12PQ8NF67 263 aa27.68■■■□□ 2.02
CPNE1-202ENST00000352393 WHAMMP3Q1A5X7 153 aa27.68■■■□□ 2.02
CPNE1-202ENST00000352393 CAVIN4Q5BKX8 364 aa27.68■■■□□ 2.02
CPNE1-202ENST00000352393 TXLNBQ8N3L3 684 aa27.68■■■□□ 2.02
CPNE1-202ENST00000352393 NUP88Q99567 741 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-202ENST00000352393 H3BQF6 201 aa27.67■■■□□ 2.02
CPNE1-202ENST00000352393 LONP1P36776 959 aaKnown RBP27.67■■■□□ 2.02
CPNE1-202ENST00000352393 C4orf32Q8N8J7 132 aa27.67■■■□□ 2.02
CPNE1-202ENST00000352393 FAM84BQ96KN1 310 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-202ENST00000352393 VEGFAP15692 232 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-202ENST00000352393 C3orf67Q6ZVT6 689 aa27.67■■■□□ 2.02
CPNE1-202ENST00000352393 NEK11Q8NG66 645 aa27.67■■■□□ 2.02
CPNE1-202ENST00000352393 NSUN4Q96CB9 384 aaKnown RBP27.67■■■□□ 2.02
CPNE1-202ENST00000352393 BSDC1Q9NW68 430 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-202ENST00000352393 LOC102724428A0A0B4J2F2 783 aa27.66■■■□□ 2.02
CPNE1-202ENST00000352393 SIK1P57059 783 aa27.66■■■□□ 2.02
CPNE1-202ENST00000352393 MSL3Q8N5Y2 521 aaKnown RBP27.66■■■□□ 2.02
CPNE1-202ENST00000352393 GDAQ9Y2T3 454 aa27.66■■■□□ 2.02
CPNE1-202ENST00000352393 COL5A3P25940 1745 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-202ENST00000352393 HNRNPH2P55795 449 aaKnown RBP27.65■■■□□ 2.02
CPNE1-202ENST00000352393 DCP1AQ9NPI6 582 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-202ENST00000352393 KRT9P35527 623 aa27.65■■■□□ 2.02
CPNE1-202ENST00000352393 PRCPP42785 496 aa27.65■■■□□ 2.02
CPNE1-202ENST00000352393 AMPD2Q01433 879 aa27.65■■■□□ 2.02
CPNE1-202ENST00000352393 SF3B3Q15393 1217 aaKnown RBP27.65■■■□□ 2.02
CPNE1-202ENST00000352393 FAM47AQ5JRC9 791 aa27.65■■■□□ 2.02
CPNE1-202ENST00000352393 TFRCP02786 760 aaKnown RBP27.64■■■□□ 2.02
CPNE1-202ENST00000352393 IRF2BP1Q8IU81 584 aa27.64■■■□□ 2.02
CPNE1-202ENST00000352393 MINPP1Q9UNW1 487 aa27.64■■■□□ 2.02
CPNE1-202ENST00000352393 FAM205AQ6ZU69 1335 aa27.64■■■□□ 2.01
CPNE1-202ENST00000352393 CALML3P27482 149 aa27.64■■■□□ 2.01
CPNE1-202ENST00000352393 SLF1Q9BQI6 1058 aa27.64■■■□□ 2.01
CPNE1-202ENST00000352393 REXO2Q9Y3B8 237 aaKnown RBP27.64■■■□□ 2.01
CPNE1-202ENST00000352393 PDS5AQ29RF7 1337 aaKnown RBP27.63■■■□□ 2.01
CPNE1-202ENST00000352393 ERLIN1O75477 346 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 MECOMQ03112 1051 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 GPS2Q13227 327 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 ERFEQ4G0M1 354 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 RCSD1Q6JBY9 416 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 ADSSL1Q8N142 457 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 CRNKL1Q9BZJ0 848 aaKnown RBP27.63■■■□□ 2.01
CPNE1-202ENST00000352393 ZNF652Q9Y2D9 606 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 CCDC88AQ3V6T2 1871 aa27.63■■■□□ 2.01
CPNE1-202ENST00000352393 CTAGE15A4D2H0 777 aa27.62■■■□□ 2.01
CPNE1-202ENST00000352393 H7C1D1 291 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms