RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ALS2CR12Q96Q35 445 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 KIF2CQ99661 725 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
SMAD9-201ENST00000350148 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
SMAD9-201ENST00000350148 CIAPIN1Q6FI81 312 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 TBC1D10CQ8IV04 446 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 AMNQ9BXJ7 453 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 MYL1P05976 194 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 CNGA4Q8IV77 575 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 PCDHA7Q9UN72 937 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD9-201ENST00000350148 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 DCAF4Q8WV16 495 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
SMAD9-201ENST00000350148 DBNDD1Q9H9R9 158 aa13.64□□□□□ -0.23
SMAD9-201ENST00000350148 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 KRT26Q7Z3Y9 468 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 USP17L8P0C7I0 530 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 TUBB4BP68371 445 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
SMAD9-201ENST00000350148 SNX29Q8TEQ0 813 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
SMAD9-201ENST00000350148 CBX8Q9HC52 389 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 TXKP42681 527 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 CRKP46108 304 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 FAM160B2Q86V87 743 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 TBC1D5Q92609 795 aa13.63□□□□□ -0.23
SMAD9-201ENST00000350148 SKILP12757 684 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 PDE4DQ08499 809 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 PAK1Q13153 545 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 PKP1Q13835 747 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 SCARF1Q14162 830 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 SKIDA1Q1XH10 827 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 DNM3Q9UQ16 869 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
SMAD9-201ENST00000350148 LARGE1O95461 756 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 PRDX5P30044 214 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 KRT83P78385 493 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 TDRD12Q587J7 1177 aaKnown RBP13.62□□□□□ -0.23
SMAD9-201ENST00000350148 ZFYVE27Q5T4F4 411 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 SH3RF3Q8TEJ3 882 aaPredicted RBP13.62□□□□□ -0.23
SMAD9-201ENST00000350148 CSADQ9Y600 493 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 SUPT20HL1Q3ZLR7 823 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 NLRX1Q86UT6 975 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 UBXN4Q92575 508 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 SCLT1Q96NL6 688 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 NUP58Q9BVL2 599 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 SEPT11Q9NVA2 429 aaKnown RBP13.62□□□□□ -0.23
SMAD9-201ENST00000350148 TCP10L2B9ZVM9 353 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
SMAD9-201ENST00000350148 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 LINC00301Q8NCQ3 95 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
SMAD9-201ENST00000350148 MMP14P50281 582 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 IFNKQ9P0W0 207 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 MRC1P22897 1456 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 CALUO43852 315 aaPredicted RBP13.61□□□□□ -0.23
SMAD9-201ENST00000350148 PLS1Q14651 629 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 CTR9Q6PD62 1173 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 SMAP1Q8IYB5 467 aaPredicted RBP13.61□□□□□ -0.23
SMAD9-201ENST00000350148 ECE2O60344 883 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 FGFR2P21802 821 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 ARL6IP4Q66PJ3 421 aaKnown RBP13.61□□□□□ -0.23
SMAD9-201ENST00000350148 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
SMAD9-201ENST00000350148 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 CPLX3Q8WVH0 158 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 NEDD4P46934 1319 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMAD9-201ENST00000350148 ZNF75DP51815 510 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 STRIP1Q5VSL9 837 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 FCHSD1Q86WN1 690 aa13.61□□□□□ -0.23
SMAD9-201ENST00000350148 TDRD7Q8NHU6 1098 aaKnown RBP13.6□□□□□ -0.23
SMAD9-201ENST00000350148 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
SMAD9-201ENST00000350148 SRRTQ9BXP5 876 aaKnown RBP13.6□□□□□ -0.23
SMAD9-201ENST00000350148 CENPHQ9H3R5 247 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 ANAPC4Q9UJX5 808 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 LIG1P18858 919 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 GRM4Q14833 912 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 RCSD1Q6JBY9 416 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 HHIPL2Q6UWX4 724 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 BIN2Q9UBW5 565 aaPredicted RBP13.6□□□□□ -0.23
SMAD9-201ENST00000350148 GNA14O95837 355 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms