RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CHP1Q99653 195 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 FUT8Q9BYC5 575 aa20.47■□□□□ 0.87
PTP4A3-202ENST00000349124 KIF5CO60282 957 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 PRCPP42785 496 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 CHMP4BP1P59074 171 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 RCSD1Q6JBY9 416 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 SLF1Q9BQI6 1058 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 ARFGAP3Q9NP61 516 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 TRIM10Q9UDY6 481 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 TSPY2A6NKD2 308 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 OAS2P29728 719 aaKnown RBP20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 TXLNAP40222 546 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 COPB1P53618 953 aaKnown RBP20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 PMS1P54277 932 aaKnown RBP20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 SMC1AQ14683 1233 aaKnown RBP20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 CTAGE1Q96RT6 745 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 NUP88Q99567 741 aaPredicted RBP20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 SUGCTQ9HAC7 445 aa20.46■□□□□ 0.87
PTP4A3-202ENST00000349124 ARAP2Q8WZ64 1704 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 DDAH1O94760 285 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 CALM1P0DP23 149 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 CALM2P0DP24 149 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 CALM3P0DP25 149 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 PNKPQ96T60 521 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 ANKZF1Q9H8Y5 726 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 CYP2C19P33261 490 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 PFKFB3Q16875 520 aaPredicted RBP20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 DYNLL2Q96FJ2 89 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 UBXN6Q9BZV1 441 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 ABHD10Q9NUJ1 306 aa20.45■□□□□ 0.86
PTP4A3-202ENST00000349124 NHSL1Q5SYE7 1610 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 LRRC10BA6NIK2 292 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 KCNJ18B7U540 433 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 BMP15O95972 392 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 RPN1P04843 607 aaKnown RBP20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 PAK1Q13153 545 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 KCNJ12Q14500 433 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 LONRF2Q1L5Z9 754 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 TCP11X2Q5H9J9 407 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 SRGAP1Q7Z6B7 1085 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 FBXO33Q7Z6M2 555 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 IRF2BP1Q8IU81 584 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 NEK11Q8NG66 645 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 LIMA1Q9UHB6 759 aaKnown RBP20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 CDC23Q9UJX2 597 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 KRT9P35527 623 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 WWC2Q6AWC2 1192 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 NAA15Q9BXJ9 866 aaKnown RBP20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 TMEM60Q9H2L4 133 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.44■□□□□ 0.86
PTP4A3-202ENST00000349124 GTPBP6O43824 516 aaPredicted RBP20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 RHOXF2BP0C7M4 288 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 ARHGAP25P42331 645 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 SLC35G1Q2M3R5 365 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 CT47A1Q5JQC4 288 aaPredicted RBP20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 CNGA4Q8IV77 575 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 RHOXF2Q9BQY4 288 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 IL17RBQ9NRM6 502 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 RWDD2AQ9UIY3 292 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 MYH14Q7Z406 1995 aaKnown RBP20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 PES1O00541 588 aaKnown RBP20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 UBXN1Q04323 297 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 CPVLQ9H3G5 476 aa20.43■□□□□ 0.86
PTP4A3-202ENST00000349124 TFAP4Q01664 338 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 LRRC15Q8TF66 581 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 DUOX1Q9NRD9 1551 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 MYH6P13533 1939 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 H3BQF6 201 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 SEMA3EO15041 775 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 ZBTB22O15209 634 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 ORC4O43929 436 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 NAALADL2Q58DX5 795 aa20.42■□□□□ 0.86
PTP4A3-202ENST00000349124 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 ZNF658Q5TYW1 1059 aaPredicted RBP20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 BLIDQ8IZY5 108 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 CRNKL1Q9BZJ0 848 aaKnown RBP20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 HIBADHP31937 336 aaKnown RBP20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 STAT6P42226 847 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 MCM6Q14566 821 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 REXO2Q9Y3B8 237 aaKnown RBP20.41■□□□□ 0.86
PTP4A3-202ENST00000349124 CTAGE9A4FU28 777 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 RPS8P62241 208 aaKnown RBP20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 PTF1AQ7RTS3 328 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 SLC44A5Q8NCS7 719 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 TTC26A0AVF1 554 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 TMTC1Q8IUR5 882 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 TRERF1Q96PN7 1200 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 ZNF652Q9Y2D9 606 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 HNRNPH2P55795 449 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms