RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SATB1Q01826 763 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 CYP26C1Q6V0L0 522 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 PNMA8AQ86V59 439 aaPredicted RBP16.98■□□□□ 0.31
PTBP1-201ENST00000349038 RNF217Q8TC41 542 aa16.98■□□□□ 0.31
PTBP1-201ENST00000349038 FAM237AA0A1B0GTK4 181 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 H7C1W4 665 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 NCK2O43639 380 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 NDUFA10O95299 355 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 SARNPP82979 210 aaKnown RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 HLTFQ14527 1009 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 LRRC24Q50LG9 513 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 SRCAPQ6ZRS2 3230 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 ARHGAP25P42331 645 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 CCDC121Q6ZUS5 278 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 TRIM49BA6NDI0 452 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 CHUKO15111 745 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 MEFVO15553 781 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 PHKG2P15735 406 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 ZNF18P17022 549 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 TRIM21P19474 475 aaKnown RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 ANTXR2P58335 489 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 KRT31Q15323 416 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-201ENST00000349038 TMTC1Q8IUR5 882 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 PLBD2Q8NHP8 589 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
PTBP1-201ENST00000349038 A0A1B0GTH6 734 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 KIF4AO95239 1232 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 CPP00450 1065 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 PLCD1P51178 756 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 PTPAQ15257 358 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 OXER1Q8TDS5 423 aa16.96■□□□□ 0.31
PTBP1-201ENST00000349038 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
PTBP1-201ENST00000349038 ZNF174Q15697 407 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 NFU1Q9UMS0 254 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 C4AP0C0L4 1744 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 C4BP0C0L5 1744 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 TTC26A0AVF1 554 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 ZBTB43O43298 467 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 PPP6R2O75170 966 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 TTMPQ5BVD1 217 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 TMEM67Q5HYA8 995 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 CFAP58Q5T655 872 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 ARMC3Q5W041 872 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 B4GALNT4Q76KP1 1039 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 CCDC13Q8IYE1 715 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 OR2W6PQ8NHA6 318 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 PUS3Q9BZE2 481 aaKnown RBP16.95■□□□□ 0.3
PTBP1-201ENST00000349038 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
PTBP1-201ENST00000349038 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
PTBP1-201ENST00000349038 BUB1O43683 1085 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 EZRP15311 586 aaKnown RBP16.95■□□□□ 0.3
PTBP1-201ENST00000349038 KLK7P49862 253 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 NFRKBQ6P4R8 1299 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 GGT7Q9UJ14 662 aa16.95■□□□□ 0.3
PTBP1-201ENST00000349038 WDR19Q8NEZ3 1342 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 EYA2O00167 538 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
PTBP1-201ENST00000349038 PRDM1O75626 825 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 SPATA1Q5VX52 437 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 MAEAQ7L5Y9 396 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 TCP11Q8WWU5 503 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 MS4A14Q96JA4 679 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 MLXIPQ9HAP2 919 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 SLC40A1Q9NP59 571 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 BAZ2BQ9UIF8 2168 aaKnown RBP16.94■□□□□ 0.3
PTBP1-201ENST00000349038 GLI3P10071 1580 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 TMOD1P28289 359 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 DPYDQ12882 1025 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 NAA35Q5VZE5 725 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 SGSM3Q96HU1 749 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-201ENST00000349038 CPDO75976 1380 aa16.94■□□□□ 0.3
PTBP1-201ENST00000349038 RCCD1A6NED2 376 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 SMIM23A6NLE4 172 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 OPA1O60313 960 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 CLTAP09496 248 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 KSR1Q8IVT5 923 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 ZIM3Q96PE6 472 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 KIF1CO43896 1103 aaKnown RBP16.93■□□□□ 0.3
PTBP1-201ENST00000349038 WDR93Q6P2C0 686 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 CALR3Q96L12 384 aaKnown RBP16.93■□□□□ 0.3
PTBP1-201ENST00000349038 GDAQ9Y2T3 454 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 GRIN2DO15399 1336 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 CIAO1O76071 339 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 ADORA1P30542 326 aa16.93■□□□□ 0.3
PTBP1-201ENST00000349038 LSP1P33241 339 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms