RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
NUP50-201ENST00000347635 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 H7C1W4 665 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
NUP50-201ENST00000347635 SERPINB2P05120 415 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
NUP50-201ENST00000347635 IQCB1Q15051 598 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 GLT8D2Q9H1C3 349 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 GREM2Q9H772 168 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 SLIT1O75093 1534 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 PHKA1P46020 1223 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 CETN1Q12798 172 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 SOS2Q07890 1332 aaPredicted RBP16.44■□□□□ 0.22
NUP50-201ENST00000347635 CTIFO43310 598 aaKnown RBP16.44■□□□□ 0.22
NUP50-201ENST00000347635 CHRNDQ07001 517 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 FAM71BQ8TC56 605 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 HAUS4Q9H6D7 363 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 SLC35F6Q8N357 371 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 NOX5Q96PH1 765 aa16.44■□□□□ 0.22
NUP50-201ENST00000347635 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
NUP50-201ENST00000347635 SOWAHDA6NJG2 315 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 MED4Q9NPJ6 270 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 SAMSN1Q9NSI8 373 aaKnown RBP16.43■□□□□ 0.22
NUP50-201ENST00000347635 GJB4Q9NTQ9 266 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
NUP50-201ENST00000347635 A6NNZ2 444 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 H7C1D1 291 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
NUP50-201ENST00000347635 TUBB8Q3ZCM7 444 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 CCDC121Q6ZUS5 278 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 TBC1D5Q92609 795 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
NUP50-201ENST00000347635 B4GALNT4Q76KP1 1039 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 IQCDQ96DY2 449 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
NUP50-201ENST00000347635 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
NUP50-201ENST00000347635 RBM26Q5T8P6 1007 aaKnown RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 PANX2Q96RD6 677 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 CCDC151A5D8V7 595 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 RPN1P04843 607 aaKnown RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 CCZ1BP86790 482 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 CCZ1P86791 482 aaPredicted RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 STOX1Q6ZVD7 989 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 CABP7Q86V35 215 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 ATP2C2O75185 946 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 SND1Q7KZF4 910 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP50-201ENST00000347635 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 MROH1Q8NDA8 1641 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 ITSN1Q15811 1721 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 ZNF804BA4D1E1 1349 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 TRAF5O00463 557 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 IFNAR1P17181 557 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 GDAP1L1Q96MZ0 367 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 IFIH1Q9BYX4 1025 aaKnown RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 RASAL2Q9UJF2 1139 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 EPN1Q9Y6I3 576 aaPredicted RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 ARMCX5Q6P1M9 558 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 FUCA2Q9BTY2 467 aa16.42■□□□□ 0.22
NUP50-201ENST00000347635 RNF26Q9BY78 433 aaPredicted RBP16.42■□□□□ 0.22
NUP50-201ENST00000347635 DNM2P50570 870 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 PTGDRQ13258 359 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 SRPRBQ9Y5M8 271 aaKnown RBP16.41■□□□□ 0.22
NUP50-201ENST00000347635 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
NUP50-201ENST00000347635 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
NUP50-201ENST00000347635 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
NUP50-201ENST00000347635 KRT25Q7Z3Z0 450 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 CCDC155Q8N6L0 562 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 ZNF609O15014 1411 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 WDR19Q8NEZ3 1342 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 TNFAIP1Q13829 316 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.22
NUP50-201ENST00000347635 ZRSR2Q15696 482 aaKnown RBP16.41■□□□□ 0.22
NUP50-201ENST00000347635 DDAH1O94760 285 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 SLFN14P0C7P3 912 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 CETN2P41208 172 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 MAGEA1P43355 309 aa16.41■□□□□ 0.22
NUP50-201ENST00000347635 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms