RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TTC38Q5R3I4 469 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 GPIHBP1Q8IV16 184 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 JMYQ8N9B5 988 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 RGS22Q8NE09 1264 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CDC5LQ99459 802 aaKnown RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 BAG1Q99933 345 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 MCM9Q9NXL9 1143 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CENPFP49454 3210 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 SYCP1Q15431 976 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 SPECC1LQ69YQ0 1117 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CLEC4GQ6UXB4 293 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 ACRBPQ8NEB7 543 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 UIMC1Q96RL1 719 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 ZCCHC17Q9NP64 241 aaKnown RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 MYH1P12882 1939 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 PFKFB3Q16875 520 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CAVIN4Q5BKX8 364 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 ERO1AQ96HE7 468 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 C8orf37Q96NL8 207 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 CHP1Q99653 195 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 MXD3Q9BW11 206 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 VPS16Q9H269 839 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 LZTFL1Q9NQ48 299 aa6.88□□□□□ -1.31
CLCN3-201ENST00000347613 RNF216Q9NWF9 866 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-201ENST00000347613 URI1O94763 535 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 SCG2P13521 617 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 PRCPP42785 496 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 SAFBQ15424 915 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 C12orf60Q5U649 245 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 BARGINQ6ZT62 677 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 MTERF4Q7Z6M4 381 aaKnown RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 CATIPQ7Z7H3 387 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 HOMER1Q86YM7 354 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 MAPKAPK5Q8IW41 473 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 PCDHA6Q9UN73 950 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 REXO2Q9Y3B8 237 aaKnown RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 PCDHA8Q9Y5H6 950 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 KLRC4O43908 158 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 TADA3O75528 432 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 KRT31Q15323 416 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 ARHGAP29Q52LW3 1261 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 NBPF5PQ86XG9 351 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 ELOA2Q8IYF1 753 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 RNF41Q9H4P4 317 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 SUGCTQ9HAC7 445 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 NARFQ9UHQ1 456 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 ORC4O43929 436 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 ZRANB2O95218 330 aaKnown RBP eCLIP6.87□□□□□ -1.311e-6■■■■■ 42
CLCN3-201ENST00000347613 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 MAP3K9P80192 1104 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 KCTD19Q17RG1 926 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-201ENST00000347613 INF2Q27J81 1249 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 TMTC2Q8N394 836 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 WASF1Q92558 559 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 TAB2Q9NYJ8 693 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 PCDHAC2Q9Y5I4 1007 aa6.87□□□□□ -1.31
CLCN3-201ENST00000347613 SNED1Q8TER0 1413 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 TSPY2A6NKD2 308 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 ERCC3P19447 782 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 KCNJ6P48051 423 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 GYS2P54840 703 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 NLRP5P59047 1200 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 GPSM2P81274 684 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 GLIPR1L2Q4G1C9 344 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 USP17L2Q6R6M4 530 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 CREBRFQ8IUR6 639 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 GLIS3Q8NEA6 775 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 SETDB2Q96T68 719 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 TMEM260Q9NX78 707 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 OGFRQ9NZT2 677 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 ADGRG1Q9Y653 693 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 SYNRGQ9UMZ2 1314 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 TOM1O60784 492 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 RASA1P20936 1047 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 GNG11P61952 73 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 CERS3Q8IU89 383 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 IGSF22Q8N9C0 903 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 PNMA1Q8ND90 353 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 ZNF397Q8NF99 534 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-201ENST00000347613 CERKQ8TCT0 537 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 TMEM47Q9BQJ4 181 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 NAV1Q8NEY1 1877 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 SMCHD1A6NHR9 2005 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 CCDC196A0A1B0GTZ2 297 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 RCCD1A6NED2 376 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 RPS6KA4O75676 772 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 ARHGAP25P42331 645 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 IQCA1Q86XH1 822 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 NLRP3Q96P20 1036 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 NUDT12Q9BQG2 462 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms