RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 AKNAD1Q5T1N1 836 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 PRPF38AQ8NAV1 312 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 GMCL1P1Q8NEA9 526 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 ESR2Q92731 530 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 ATG4CQ96DT6 458 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 SPATC1LQ9H0A9 340 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 PORCNQ9H237 461 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 SLC5A4Q9NY91 659 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 BTBD7Q9P203 1132 aa18.63■□□□□ 0.57
TSPAN4-201ENST00000346501 SLC15A5A6NIM6 579 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 STRNO43815 780 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 PEX10O60683 326 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 SLC25A27O95847 323 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 HMGCRP04035 888 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 XRCC5P13010 732 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 CAPN2P17655 700 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 SLFN13Q68D06 897 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 LRRC47Q8N1G4 583 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 SHCBP1Q8NEM2 672 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 STAG1Q8WVM7 1258 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 MROH8Q9H579 483 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 FEM1BQ9UK73 627 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 GJD2Q9UKL4 321 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 PPP1R9AQ9ULJ8 1098 aa18.62■□□□□ 0.57
TSPAN4-201ENST00000346501 ZBED4O75132 1171 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 CNMDO75829 334 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 INHAP05111 366 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 FGRP09769 529 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 BMP3P12645 472 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 CCL5P13501 91 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 SLC1A4P43007 532 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 MAP2K5Q13163 448 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 CHURC1Q8WUH1 139 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 APBA2Q99767 749 aa18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 MOV10L1Q9BXT6 1211 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-201ENST00000346501 POTEFA5A3E0 1075 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 FDX1P10109 184 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 PTPREP23469 700 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 CHMLP26374 656 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 KIAA1211Q6ZU35 1233 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 DPP9Q86TI2 863 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 IQCA1Q86XH1 822 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 NUP88Q99567 741 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 CNNM2Q9H8M5 875 aa18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 GREB1LQ9C091 1923 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-201ENST00000346501 VWA5AO00534 786 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 GJB1P08034 283 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 ERCC3P19447 782 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 TRDNQ13061 729 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 MTFR1Q15390 333 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 FAM160B2Q86V87 743 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 KIFC2Q96AC6 838 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 KRT23Q9C075 422 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 HMX1Q9NP08 348 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 TCP11L1Q9NUJ3 509 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 KIAA0100Q14667 2235 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 MYH4Q9Y623 1939 aa18.59■□□□□ 0.57
TSPAN4-201ENST00000346501 DOCK3Q8IZD9 2030 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 TOP1P11387 765 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 FCER1AP12319 257 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 EN2P19622 333 aaPredicted RBP18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 STAT3P40763 770 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 STAT2P52630 851 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 MORN1Q5T089 497 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 MFSD14CQ5VZR4 134 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 CASC1Q6TDU7 716 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 GMCL1Q96IK5 515 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 TTC14Q96N46 770 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 ADAMTS5Q9UNA0 930 aa18.58■□□□□ 0.56
TSPAN4-201ENST00000346501 TMEM232C9JQI7 657 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 MCCP23508 829 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 GRB14Q14449 540 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 KCTD2Q14681 263 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 TMEM132BQ14DG7 1078 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 CCDC96Q2M329 555 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 POTEEQ6S8J3 1075 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 ABRAQ8N0Z2 381 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 TEX13BQ9BXU2 312 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 IL17RBQ9NRM6 502 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 MTMR7Q9Y216 660 aa18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-201ENST00000346501 RPTORQ8N122 1335 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 NMT2O60551 498 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 GJA8P48165 433 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 RCSD1Q6JBY9 416 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 RIOX2Q8IUF8 465 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 TBC1D10CQ8IV04 446 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 DCAF4Q8WV16 495 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 UNC93B1Q9H1C4 597 aa18.56■□□□□ 0.56
TSPAN4-201ENST00000346501 TFRCP02786 760 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 ADORA2AP29274 412 aa18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 SLC4A3P48751 1232 aa18.55■□□□□ 0.56
TSPAN4-201ENST00000346501 CPXCR1Q8N123 301 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms