RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 TTBK2Q6IQ55 1244 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 HHIPL1Q96JK4 782 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 ZIC5Q96T25 663 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 SLKQ9H2G2 1235 aaPredicted RBP27.34■■□□□ 1.97
NR6A1-201ENST00000344523 MAD2L2Q9UI95 211 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 PPFIA3O75145 1194 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 PARP1P09874 1014 aaKnown RBP27.33■■□□□ 1.97
NR6A1-201ENST00000344523 SNHG28P0DPA3 235 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 ADD1P35611 737 aaKnown RBP27.33■■□□□ 1.97
NR6A1-201ENST00000344523 GTF2A2P52657 109 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 C1QTNF8P60827 252 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 MOGSQ13724 837 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 SAMD1Q6SPF0 538 aaPredicted RBP27.33■■□□□ 1.97
NR6A1-201ENST00000344523 CCDC102AQ96A19 550 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 GMCL1Q96IK5 515 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 TMX3Q96JJ7 454 aa27.33■■□□□ 1.97
NR6A1-201ENST00000344523 FAM217BQ9NTX9 383 aaPredicted RBP27.33■■□□□ 1.97
NR6A1-201ENST00000344523 RASSF10A6NK89 507 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 BMP3P12645 472 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 GRM4Q14833 912 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 CCDC82Q8N4S0 544 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 CTCFLQ8NI51 663 aaPredicted RBP27.32■■□□□ 1.96
NR6A1-201ENST00000344523 RPAP3Q9H6T3 665 aaPredicted RBP27.32■■□□□ 1.96
NR6A1-201ENST00000344523 CCL15-CCL14A0A0B4J2E2 113 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 ZNF543Q08ER8 600 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 SCRN1Q12765 414 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 CCL15Q16663 113 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 RTN1Q16799 776 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 DCAF4Q8WV16 495 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 LPAR1Q92633 364 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 UBA5Q9GZZ9 404 aa27.32■■□□□ 1.96
NR6A1-201ENST00000344523 TMEM232C9JQI7 657 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 PFKFB2O60825 505 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 CALM1P0DP23 149 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 CALM2P0DP24 149 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 CALM3P0DP25 149 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 SLC16A2P36021 539 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 MCM2P49736 904 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 BRI3BPQ8WY22 251 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 SNX21Q969T3 373 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 C12orf42Q96LP6 360 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 TANGO6Q9C0B7 1094 aa27.31■■□□□ 1.96
NR6A1-201ENST00000344523 PLEKHA8P1O95397 391 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 CETPP11597 493 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 CAPNS2Q96L46 248 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 FBXO28Q9NVF7 368 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 PALM3A6NDB9 673 aaPredicted RBP27.3■■□□□ 1.96
NR6A1-201ENST00000344523 WDR46O15213 610 aaKnown RBP27.3■■□□□ 1.96
NR6A1-201ENST00000344523 AOC2O75106 756 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 ST3GAL1Q11201 340 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 NBPF11Q86T75 865 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 CCDC83Q8IWF9 413 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 HSCBQ8IWL3 235 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 IL27Q8NEV9 243 aa27.3■■□□□ 1.96
NR6A1-201ENST00000344523 ZSCAN31Q96LW9 406 aaPredicted RBP27.3■■□□□ 1.96
NR6A1-201ENST00000344523 KLRF2D3W0D1 207 aa27.29■■□□□ 1.96
NR6A1-201ENST00000344523 IKQ13123 557 aaPredicted RBP27.29■■□□□ 1.96
NR6A1-201ENST00000344523 FASTKD5Q7L8L6 764 aaKnown RBP27.29■■□□□ 1.96
NR6A1-201ENST00000344523 KIF5BP33176 963 aa27.28■■□□□ 1.96
NR6A1-201ENST00000344523 GPAT2Q6NUI2 795 aa27.28■■□□□ 1.96
NR6A1-201ENST00000344523 PROCA1Q8NCQ7 364 aaPredicted RBP27.28■■□□□ 1.96
NR6A1-201ENST00000344523 PTPN18Q99952 460 aa27.28■■□□□ 1.96
NR6A1-201ENST00000344523 K7ELQ4 463 aaPredicted RBP27.27■■□□□ 1.96
NR6A1-201ENST00000344523 SLC35G1Q2M3R5 365 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 ASPRV1Q53RT3 343 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 PIBF1Q8WXW3 757 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 GTF3C6Q969F1 213 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 MAP3K14Q99558 947 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 VAT1LQ9HCJ6 419 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 RCAN1P53805 252 aa27.27■■□□□ 1.96
NR6A1-201ENST00000344523 GPATCH4Q5T3I0 446 aaKnown RBP27.27■■□□□ 1.96
NR6A1-201ENST00000344523 SRBD1Q8N5C6 995 aaKnown RBP27.27■■□□□ 1.96
NR6A1-201ENST00000344523 SH2B1Q9NRF2 756 aaPredicted RBP27.27■■□□□ 1.96
NR6A1-201ENST00000344523 BTBD19C9JJ37 291 aa27.26■■□□□ 1.95
NR6A1-201ENST00000344523 HSPA6P17066 643 aa27.26■■□□□ 1.95
NR6A1-201ENST00000344523 KIF23Q02241 960 aaPredicted RBP27.26■■□□□ 1.95
NR6A1-201ENST00000344523 AGTPBP1Q9UPW5 1226 aa27.26■■□□□ 1.95
NR6A1-201ENST00000344523 FLOT1O75955 427 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 SNAP25P60880 206 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 TMTC3Q6ZXV5 915 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 KIFC2Q96AC6 838 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 RBM28Q9NW13 759 aaKnown RBP27.25■■□□□ 1.95
NR6A1-201ENST00000344523 MANSC4A6NHS7 340 aaPredicted RBP27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L15C9J2P7 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L13C9JLJ4 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L11C9JVI0 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L18D6R9N7 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L22D6RA61 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L17D6RBQ6 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L19D6RCP7 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L20D6RJB6 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 CPLX1O14810 134 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 VEGFBP49765 207 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 STAT2P52630 851 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 USP17L24Q0WX57 530 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 CATSPERGQ6ZRH7 1159 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 FAM43AQ8N2R8 423 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 PHKBQ93100 1093 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 PTPRFP10586 1907 aa27.25■■□□□ 1.95
NR6A1-201ENST00000344523 hCG_1642624A0A1W2PR95 340 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms