RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 ZNF213O14771 459 aa15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 CYP7A1P22680 504 aa15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 IRX3P78415 501 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 CACNB2Q08289 660 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 MTMR2Q13614 643 aa15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 P2RX7Q99572 595 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 DDX11L8A8MPP1 907 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 PEX10O60683 326 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 LARGE1O95461 756 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 HERVK_113P62684 666 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 LHX8Q68G74 356 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 CLEC17AQ6ZS10 378 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 TEX11Q8IYF3 940 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 GPRC5AQ8NFJ5 357 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 AGXT2Q9BYV1 514 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 PI4KBQ9UBF8 816 aa15.81■□□□□ 0.12
HERPUD1-202ENST00000344114 C19orf81C9J6K1 198 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 APPP05067 770 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 ASNSP08243 561 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 PTMSP20962 102 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 MAPK4P31152 587 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 MCM4P33991 863 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 JAG1P78504 1218 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 EXOSC10Q01780 885 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 ME3Q16798 604 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 LRRC26Q2I0M4 334 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 MORN1Q5T089 497 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 NAA16Q6N069 864 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 Q6ZUG5 572 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 FBXL16Q8N461 479 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 NCOA7Q8NI08 942 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 NACAP1Q9BZK3 213 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 NAPBQ9H115 298 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 TMOD4Q9NZQ9 345 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
HERPUD1-202ENST00000344114 MAGEB6P1A0A0J9YX57 407 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 CCND3P30281 292 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 ERVK-9P63128 1117 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 ERVK-24P63145 666 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 Q3C1V9 767 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 FAM109BQ6ICB4 259 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 GPR142Q7Z601 462 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 RALYLQ86SE5 291 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 IFNL3Q8IZI9 196 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 LCORLQ8N3X6 602 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 TCEANC2Q96MN5 208 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 EPB41L4AQ9HCS5 686 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 GINM1Q9NU53 330 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 TPCN1Q9ULQ1 816 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 SMC3Q9UQE7 1217 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 UNC80Q8N2C7 3258 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 LTBP2Q14767 1821 aa15.79■□□□□ 0.12
HERPUD1-202ENST00000344114 USP17L10C9JJH3 530 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 RGS2P41220 211 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 HAND2P61296 217 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 FGD1P98174 961 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 TRDNQ13061 729 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 CCL14Q16627 93 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 POTEEQ6S8J3 1075 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 MB21D2Q8IYB1 491 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 GTF3C2Q8WUA4 911 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 APBA2Q99767 749 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 COL25A1Q9BXS0 654 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 PORCNQ9H237 461 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 SLC4A4Q9Y6R1 1079 aa15.78■□□□□ 0.12
HERPUD1-202ENST00000344114 GSG1L2A8MUP6 293 aa15.77■□□□□ 0.12
HERPUD1-202ENST00000344114 PDIA4P13667 645 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-202ENST00000344114 MCM5P33992 734 aa15.77■□□□□ 0.12
HERPUD1-202ENST00000344114 MDM2Q00987 491 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-202ENST00000344114 CHMP4CQ96CF2 233 aa15.77■□□□□ 0.12
HERPUD1-202ENST00000344114 FLT1P17948 1338 aa15.77■□□□□ 0.11
HERPUD1-202ENST00000344114 GOLGA6L22H0YM25 854 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 BRD1O95696 1058 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 TDO2P48775 406 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 PPP4CP60510 307 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 SHROOM1Q2M3G4 852 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 PLEKHH3Q7Z736 793 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 ADGRA1Q86SQ6 560 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 FOXP4Q8IVH2 680 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 MIGA1Q8NAN2 632 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 BRF1Q92994 677 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 GUCD1Q96NT3 240 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 RIOK1Q9BRS2 568 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 LARP6Q9BRS8 491 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 AATFQ9NY61 560 aaKnown RBP eCLIP15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 ZBTB21Q9ULJ3 1066 aa15.76■□□□□ 0.11
HERPUD1-202ENST00000344114 BAG3O95817 575 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 PLCG2P16885 1265 aa15.75■□□□□ 0.11
HERPUD1-202ENST00000344114 PKP1Q13835 747 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms