RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 KLHL40Q2TBA0 621 aa11.27□□□□□ -0.61
CLDN18-202ENST00000343735 MYH8P13535 1937 aa11.27□□□□□ -0.61
CLDN18-202ENST00000343735 WDR90Q96KV7 1748 aa11.27□□□□□ -0.61
CLDN18-202ENST00000343735 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 ICA1Q05084 483 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLDN18-202ENST00000343735 TTC12Q9H892 705 aaPredicted RBP11.26□□□□□ -0.61
CLDN18-202ENST00000343735 VEGFAP15692 232 aaPredicted RBP11.26□□□□□ -0.61
CLDN18-202ENST00000343735 ST3GAL1Q11201 340 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 GRM4Q14833 912 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 MIGA2Q7L4E1 593 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 FAM196BA6NMK8 535 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 GH2P01242 217 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
CLDN18-202ENST00000343735 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 ATP6V1DQ9Y5K8 247 aa11.26□□□□□ -0.61
CLDN18-202ENST00000343735 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
CLDN18-202ENST00000343735 BIN1O00499 593 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 XBP1P17861 261 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 SKOR2Q2VWA4 1001 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 KRT26Q7Z3Y9 468 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 AIFM3Q96NN9 605 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 ZBTB21Q9ULJ3 1066 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 SIPA1L1O43166 1804 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 GDF11O95390 407 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 SEPT2Q15019 361 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 DCAF4Q8WV16 495 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 ZNF112Q9UJU3 913 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 DEXIO95424 95 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 EEF2P13639 858 aaKnown RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 CDC27P30260 824 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 TRIM29Q14134 588 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
CLDN18-202ENST00000343735 GMCL1P1Q8NEA9 526 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 AS3MTQ9HBK9 375 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
CLDN18-202ENST00000343735 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 BRD1O95696 1058 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 LIG1P18858 919 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 TMTC3Q6ZXV5 915 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
CLDN18-202ENST00000343735 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
CLDN18-202ENST00000343735 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 PRPF3O43395 683 aaKnown RBP11.24□□□□□ -0.61
CLDN18-202ENST00000343735 NTRK3Q16288 839 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 PICK1Q9NRD5 415 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
CLDN18-202ENST00000343735 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
CLDN18-202ENST00000343735 F13A1P00488 732 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 SLC26A6Q9BXS9 759 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
CLDN18-202ENST00000343735 CCDC173Q0VFZ6 552 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 SCYL3Q8IZE3 742 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
CLDN18-202ENST00000343735 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
CLDN18-202ENST00000343735 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 TMX2Q9Y320 296 aa11.23□□□□□ -0.61
CLDN18-202ENST00000343735 UNCXA6NJT0 531 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 KLRF2D3W0D1 207 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 PDHBP11177 359 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 CBX1P83916 185 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 SPECC1Q5M775 1068 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 NOL9Q5SY16 702 aaKnown RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 CREBRFQ8IUR6 639 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 SPZ1Q9BXG8 430 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 TSPY26PQ9H489 355 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 POTECB2RU33 542 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 USP14P54578 494 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 KLRG1Q96E93 195 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 SPATA32Q96LK8 384 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 WRNIP1Q96S55 665 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 ALG1Q9BT22 464 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 ZSCAN16Q9H4T2 348 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 SLC1A4P43007 532 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 LDHDQ86WU2 507 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 PHKBQ93100 1093 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms