RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 SHISA4Q96DD7 197 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 ISCA1Q9BUE6 129 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
HOXA1-201ENST00000343060 PIH1D3Q9NQM4 214 aaKnown RBP10.86□□□□□ -0.67
HOXA1-201ENST00000343060 RNF216Q9NWF9 866 aaPredicted RBP10.86□□□□□ -0.67
HOXA1-201ENST00000343060 CAPN11Q9UMQ6 739 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 CCDC196A0A1B0GTZ2 297 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 TTC26A0AVF1 554 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 SHTN1A0MZ66 631 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 LGALS16A8MUM7 142 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 CYP27B1O15528 508 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 ZEB2O60315 1214 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 PDE6AP16499 860 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 TNFRSF8P28908 595 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 SPATS2Q86XZ4 545 aaKnown RBP10.86□□□□□ -0.67
HOXA1-201ENST00000343060 GSPT2Q8IYD1 628 aaKnown RBP10.86□□□□□ -0.67
HOXA1-201ENST00000343060 ZNF507Q8TCN5 953 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 KRT23Q9C075 422 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 VPS16Q9H269 839 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 CABP5Q9NP86 173 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 BCORQ6W2J9 1755 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 PDS5AQ29RF7 1337 aaKnown RBP10.85□□□□□ -0.67
HOXA1-201ENST00000343060 ZNF532Q9HCE3 1301 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
HOXA1-201ENST00000343060 SRGAP2O75044 1071 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 CLSTN1O94985 981 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 FSBPO95073 299 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 CSF1RP07333 972 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 INPP5BP32019 993 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 FNTAP49354 379 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 CCDC122Q5T0U0 273 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 PDXDC2PQ6P474 469 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
HOXA1-201ENST00000343060 IRF2BP1Q8IU81 584 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 MB21D1Q8N884 522 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 BCAS4Q8TDM0 211 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 PYM1Q9BRP8 204 aaKnown RBP10.85□□□□□ -0.67
HOXA1-201ENST00000343060 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
HOXA1-201ENST00000343060 ADAMTSL3P82987 1691 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 LRP5O75197 1615 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 KRT86O43790 486 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 PSEN1P49768 467 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 AKNAD1Q5T1N1 836 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 ZNF658Q5TYW1 1059 aaPredicted RBP10.85□□□□□ -0.67
HOXA1-201ENST00000343060 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 NELFBQ8WX92 580 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 TTYH3Q9C0H2 523 aa10.85□□□□□ -0.67
HOXA1-201ENST00000343060 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 H7C1D1 291 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 OPA1O60313 960 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 ARID4AP29374 1257 aaPredicted RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 GNGT1P63211 74 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 ATP2C1P98194 919 aaPredicted RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 DDR1Q08345 913 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 RRAGBQ5VZM2 374 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 CCDC170Q8IYT3 715 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 TNFRSF25Q93038 417 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 CAVIN3Q969G5 261 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 TACO1Q9BSH4 297 aaKnown RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 PHF20Q9BVI0 1012 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 EHD4Q9H223 541 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 CXorf56Q9H5V9 222 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 LUC7L2Q9Y383 392 aaKnown RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 PATL2C9JE40 543 aaKnown RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 ZMYND10O75800 440 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 APPP05067 770 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 CYLC1P35663 651 aaPredicted RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 UBXN1Q04323 297 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 NNTQ13423 1086 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 ALS2CLQ60I27 953 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 CCDC70Q6NSX1 233 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 EMBQ6PCB8 327 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 B4GALNT4Q76KP1 1039 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 YTHDF3Q7Z739 585 aaKnown RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 IFNL3Q8IZI9 196 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 CAPZA3Q96KX2 299 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 MTRQ99707 1265 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 GNL3LQ9NVN8 582 aaKnown RBP10.84□□□□□ -0.67
HOXA1-201ENST00000343060 RMND1Q9NWS8 449 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 RIPOR2Q9Y4F9 1068 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 PLCH1Q4KWH8 1693 aa10.84□□□□□ -0.67
HOXA1-201ENST00000343060 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
HOXA1-201ENST00000343060 PRLRP16471 622 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
HOXA1-201ENST00000343060 KRT2P35908 639 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 EPHB4P54760 987 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 CDK17Q00537 523 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 WTAPQ15007 396 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 PPP2R5BQ15173 497 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 EARS2Q5JPH6 523 aaKnown RBP10.83□□□□□ -0.68
HOXA1-201ENST00000343060 FBXW10Q5XX13 1052 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms