RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 IL1R1P14778 569 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 RASA1P20936 1047 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 POLLQ9UGP5 575 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 GGA1Q9UJY5 639 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 MTMR7Q9Y216 660 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 CYTH3O43739 400 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 IGSF3O75054 1194 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 LDHCP07864 332 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 ATP2B4P23634 1241 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 RASGRP2Q7LDG7 609 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 RASGRP4Q8TDF6 673 aa22.88■■□□□ 1.25
SPG7-202ENST00000341316 SAMSN1Q9NSI8 373 aaKnown RBP22.88■■□□□ 1.25
SPG7-202ENST00000341316 DDX41Q9UJV9 622 aaKnown RBP22.88■■□□□ 1.25
SPG7-202ENST00000341316 CD44P16070 742 aaKnown RBP22.87■■□□□ 1.25
SPG7-202ENST00000341316 ST5P78524 1137 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 DDR1Q08345 913 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 ZNF444Q8N0Y2 327 aaPredicted RBP22.87■■□□□ 1.25
SPG7-202ENST00000341316 STAMQ92783 540 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 TMEM47Q9BQJ4 181 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 TCP11L1Q9NUJ3 509 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 TRAPPC10P48553 1259 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 DPYDQ12882 1025 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 BLIDQ8IZY5 108 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 NAV1Q8NEY1 1877 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 RBM17Q96I25 401 aaKnown RBP22.87■■□□□ 1.25
SPG7-202ENST00000341316 DACH1Q9UI36 760 aa22.87■■□□□ 1.25
SPG7-202ENST00000341316 GPR75-ASB3A0A0A6YYF3 556 aa22.86■■□□□ 1.25
SPG7-202ENST00000341316 E2F4Q16254 413 aa22.86■■□□□ 1.25
SPG7-202ENST00000341316 AMOTL1Q8IY63 956 aa22.86■■□□□ 1.25
SPG7-202ENST00000341316 ERO1AQ96HE7 468 aa22.86■■□□□ 1.25
SPG7-202ENST00000341316 PPP1R13BQ96KQ4 1090 aa22.86■■□□□ 1.25
SPG7-202ENST00000341316 STX8Q9UNK0 236 aa22.86■■□□□ 1.25
SPG7-202ENST00000341316 KIF2AO00139 706 aaPredicted RBP22.85■■□□□ 1.25
SPG7-202ENST00000341316 HSPA1LP34931 641 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 C4orf32Q8N8J7 132 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 ZNF397Q8NF99 534 aaPredicted RBP22.85■■□□□ 1.25
SPG7-202ENST00000341316 GOLGB1Q14789 3259 aaKnown RBP22.85■■□□□ 1.25
SPG7-202ENST00000341316 M0R2N6 131 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 KMT5BQ4FZB7 885 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 SMYD4Q8IYR2 804 aaPredicted RBP22.85■■□□□ 1.25
SPG7-202ENST00000341316 TBC1D16Q8TBP0 767 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 TMX1Q9H3N1 280 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 PCDHA4Q9UN74 947 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 SNED1Q8TER0 1413 aa22.85■■□□□ 1.25
SPG7-202ENST00000341316 GOLGA8HP0CJ92 632 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 TOP1P11387 765 aaKnown RBP22.84■■□□□ 1.25
SPG7-202ENST00000341316 ELF2Q15723 593 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 MFSD14BQ5SR56 506 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 WWC2Q6AWC2 1192 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 TEX11Q8IYF3 940 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 MTRQ99707 1265 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 CPVLQ9H3G5 476 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 SH3GLB2Q9NR46 395 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 SLU7O95391 586 aaKnown RBP22.84■■□□□ 1.25
SPG7-202ENST00000341316 CALML3P27482 149 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 KCNJ6P48051 423 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 CDK8P49336 464 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 NT5C2P49902 561 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 RHBDL3P58872 404 aa22.84■■□□□ 1.25
SPG7-202ENST00000341316 FLT1P17948 1338 aa22.83■■□□□ 1.25
SPG7-202ENST00000341316 PALM3A6NDB9 673 aaPredicted RBP22.83■■□□□ 1.25
SPG7-202ENST00000341316 CDK11BP21127 795 aaKnown RBP22.83■■□□□ 1.25
SPG7-202ENST00000341316 ERCC5P28715 1186 aaPredicted RBP22.83■■□□□ 1.25
SPG7-202ENST00000341316 CUL4BQ13620 913 aa22.83■■□□□ 1.25
SPG7-202ENST00000341316 CDK5RAP2Q96SN8 1893 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 PSDA5PKW4 1024 aaPredicted RBP22.83■■□□□ 1.24
SPG7-202ENST00000341316 BBOX1O75936 387 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 CDC25AP30304 524 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 HOXA10P31260 410 aaPredicted RBP22.83■■□□□ 1.24
SPG7-202ENST00000341316 TBX2Q13207 712 aaPredicted RBP22.83■■□□□ 1.24
SPG7-202ENST00000341316 DHX8Q14562 1220 aaKnown RBP22.83■■□□□ 1.24
SPG7-202ENST00000341316 KLHL10Q6JEL2 608 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 PDXDC2PQ6P474 469 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 C16orf86Q6ZW13 317 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 PODXL2Q9NZ53 605 aa22.83■■□□□ 1.24
SPG7-202ENST00000341316 TRPC5Q9UL62 973 aaPredicted RBP22.83■■□□□ 1.24
SPG7-202ENST00000341316 POLRMTO00411 1230 aaKnown RBP22.82■■□□□ 1.24
SPG7-202ENST00000341316 GNAQP50148 359 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 STX17P56962 302 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 CCDC178Q5BJE1 867 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 EYA3Q99504 573 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 BLZF1Q9H2G9 400 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 PCDHA6Q9UN73 950 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 PCDHA8Q9Y5H6 950 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
SPG7-202ENST00000341316 PPP1R3GB7ZBB8 358 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 STXBP3O00186 592 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 HEATR3Q7Z4Q2 680 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 TMEM139Q8IV31 216 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 CCDC34Q96HJ3 373 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 GSDMAQ96QA5 445 aa22.82■■□□□ 1.24
SPG7-202ENST00000341316 FBXO38Q6PIJ6 1188 aa22.81■■□□□ 1.24
SPG7-202ENST00000341316 APTXQ7Z2E3 356 aaKnown RBP22.81■■□□□ 1.24
SPG7-202ENST00000341316 SYT10Q6XYQ8 523 aa22.8■■□□□ 1.24
SPG7-202ENST00000341316 IQUBQ8NA54 791 aa22.8■■□□□ 1.24
SPG7-202ENST00000341316 FAM163AQ96GL9 167 aaPredicted RBP22.8■■□□□ 1.24
SPG7-202ENST00000341316 C6orf229H3BNL8 230 aa22.8■■□□□ 1.24
SPG7-202ENST00000341316 BARHL2Q9NY43 387 aa22.8■■□□□ 1.24
SPG7-202ENST00000341316 GAKO14976 1311 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms