RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TAF5LO75529 589 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 DGAT1O75907 488 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 SLC5A1P13866 664 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 CSF2RAP15509 400 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 IGHMBP2P38935 993 aaKnown RBP14.43□□□□□ -0.1
ATXN3-201ENST00000340660 LEXMQ3ZCV2 418 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 APOBEC3HQ6NTF7 200 aaKnown RBP14.43□□□□□ -0.1
ATXN3-201ENST00000340660 DGLUCYQ7Z3D6 616 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 GPR142Q7Z601 462 aa14.43□□□□□ -0.1
ATXN3-201ENST00000340660 DXOO77932 396 aaKnown RBP14.42□□□□□ -0.1
ATXN3-201ENST00000340660 FOXC1Q12948 553 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 LRRC41Q15345 812 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 AMHR2Q16671 573 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 ST3GAL2Q16842 350 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 PSRC1Q6PGN9 363 aaPredicted RBP14.42□□□□□ -0.1
ATXN3-201ENST00000340660 CCDC174Q6PII3 467 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 TDRD7Q8NHU6 1098 aaKnown RBP14.42□□□□□ -0.1
ATXN3-201ENST00000340660 PORCNQ9H237 461 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 UBE2ZQ9H832 354 aaPredicted RBP14.42□□□□□ -0.1
ATXN3-201ENST00000340660 TBX21Q9UL17 535 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 KMT2EQ8IZD2 1858 aa14.42□□□□□ -0.1
ATXN3-201ENST00000340660 CYBAP13498 195 aa14.41□□□□□ -0.1
ATXN3-201ENST00000340660 CYP2C19P33261 490 aa14.41□□□□□ -0.1
ATXN3-201ENST00000340660 BMP8AQ7Z5Y6 402 aa14.41□□□□□ -0.1
ATXN3-201ENST00000340660 PROCA1Q8NCQ7 364 aaPredicted RBP14.41□□□□□ -0.1
ATXN3-201ENST00000340660 FAM151AQ8WW52 585 aa14.41□□□□□ -0.1
ATXN3-201ENST00000340660 RMDN1Q96DB5 314 aa14.41□□□□□ -0.1
ATXN3-201ENST00000340660 LOC285556D6RIA3 1793 aa14.41□□□□□ -0.1
ATXN3-201ENST00000340660 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.4□□□□□ -0.1
ATXN3-201ENST00000340660 CD2BP2O95400 341 aaKnown RBP14.4□□□□□ -0.1
ATXN3-201ENST00000340660 MAPK4P31152 587 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
ATXN3-201ENST00000340660 TCP10Q12799 353 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 PTCRAQ6ISU1 281 aaPredicted RBP14.4□□□□□ -0.1
ATXN3-201ENST00000340660 CCDC191Q8NCU4 936 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 ZDHHC15Q96MV8 337 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 MYD88Q99836 296 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 PHF24Q9UPV7 400 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 DLG5Q8TDM6 1919 aa14.4□□□□□ -0.1
ATXN3-201ENST00000340660 FAM208BQ5VWN6 2430 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 FAM187AA6NFU0 413 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 IGHA2P01877 340 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 EPHA10Q5JZY3 1008 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 ANKRD33Q7Z3H0 272 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 PLEKHH3Q7Z736 793 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 GPRC5AQ8NFJ5 357 aa14.39□□□□□ -0.11
ATXN3-201ENST00000340660 LPXNO60711 386 aa14.38□□□□□ -0.11
ATXN3-201ENST00000340660 KCNA5P22460 613 aa14.38□□□□□ -0.11
ATXN3-201ENST00000340660 ZP2Q05996 745 aa14.38□□□□□ -0.11
ATXN3-201ENST00000340660 KRT24Q2M2I5 525 aa14.38□□□□□ -0.11
ATXN3-201ENST00000340660 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
ATXN3-201ENST00000340660 EDC3Q96F86 508 aaKnown RBP14.38□□□□□ -0.11
ATXN3-201ENST00000340660 TOX2Q96NM4 488 aa14.38□□□□□ -0.11
ATXN3-201ENST00000340660 CWC25Q9NXE8 425 aaPredicted RBP14.38□□□□□ -0.11
ATXN3-201ENST00000340660 H0Y858 1186 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 CA3P07451 260 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 NFIAQ12857 509 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 GRB10Q13322 594 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 PBXIP1Q96AQ6 731 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 MPHOSPH8Q99549 860 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 FSD1Q9BTV5 496 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 TLR9Q9NR96 1032 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 MUTYHQ9UIF7 546 aa14.37□□□□□ -0.11
ATXN3-201ENST00000340660 ZBTB24O43167 697 aaPredicted RBP14.36□□□□□ -0.11
ATXN3-201ENST00000340660 ARHGEF15O94989 841 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.11
ATXN3-201ENST00000340660 PKN1Q16512 942 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 FAM47AQ5JRC9 791 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 ARNTL2Q8WYA1 636 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 IRF2BPLQ9H1B7 796 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
ATXN3-201ENST00000340660 DOCK1Q14185 1865 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 A0A1W2PQ45 241 aaPredicted RBP14.35□□□□□ -0.11
ATXN3-201ENST00000340660 A0A1W2PQY0 241 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 DCDC2CA8MYV0 355 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 ITGA6P23229 1130 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 IRS1P35568 1242 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 HMGCS2P54868 508 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 VCPP55072 806 aaKnown RBP14.35□□□□□ -0.11
ATXN3-201ENST00000340660 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
ATXN3-201ENST00000340660 OTOP2Q7RTS6 562 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
ATXN3-201ENST00000340660 ZFPM1Q8IX07 1006 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 ADSSL1Q8N142 457 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 NPLOC4Q8TAT6 608 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 SPIRE2Q8WWL2 714 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 IL23AQ9NPF7 189 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 IGSF5Q9NSI5 407 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 TOR4AQ9NXH8 423 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 PCDHGC3Q9UN70 934 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 MYH3P11055 1940 aa14.35□□□□□ -0.11
ATXN3-201ENST00000340660 TMEM221A6NGB7 291 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 M0R296 226 aa14.34□□□□□ -0.11
ATXN3-201ENST00000340660 APBB1O00213 710 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms