RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 FGRP09769 529 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 GUCY2CP25092 1073 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 IFIT1BQ5T764 474 aaKnown RBP17.24■□□□□ 0.35
BRAT1-201ENST00000340611 AMOTL1Q8IY63 956 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 FAM212AQ96EL1 285 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
BRAT1-201ENST00000340611 ERCC6LQ2NKX8 1250 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 FBXL16Q8N461 479 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-201ENST00000340611 OSBPL5Q9H0X9 879 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-201ENST00000340611 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 GMLQ99445 158 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
BRAT1-201ENST00000340611 FOCADQ5VW36 1801 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 A0A087WWV3 80 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 ORC4O43929 436 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 LIFRP42702 1097 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 ZNF444Q8N0Y2 327 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-201ENST00000340611 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 WDR19Q8NEZ3 1342 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 RCSD1Q6JBY9 416 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 VEZTQ9HBM0 779 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 CEP83Q9Y592 693 aa17.23■□□□□ 0.35
BRAT1-201ENST00000340611 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 PLA2G4AP47712 749 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
BRAT1-201ENST00000340611 ORC3Q9UBD5 711 aaPredicted RBP17.22■□□□□ 0.35
BRAT1-201ENST00000340611 SERPINA10Q9UK55 444 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
BRAT1-201ENST00000340611 ELP1O95163 1332 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 ANKRD65E5RJM6 399 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 TXLNBQ8N3L3 684 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
BRAT1-201ENST00000340611 FHOD1Q9Y613 1164 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 PSME4Q14997 1843 aa17.22■□□□□ 0.35
BRAT1-201ENST00000340611 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
BRAT1-201ENST00000340611 PLEKHA8P1O95397 391 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 AKR1B1P15121 316 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 CPVLQ9H3G5 476 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 DNAJC18Q9H819 358 aa17.21■□□□□ 0.35
BRAT1-201ENST00000340611 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.34
BRAT1-201ENST00000340611 H3BQV1 296 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 PDCP20941 246 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 DLGAP5Q15398 846 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 GRIPAP1Q4V328 841 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 LRRN4CLQ8ND94 238 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 RRP15Q9Y3B9 282 aaKnown RBP17.2■□□□□ 0.34
BRAT1-201ENST00000340611 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 PNMA6AP0CW24 399 aaPredicted RBP17.2■□□□□ 0.34
BRAT1-201ENST00000340611 CLCN6P51797 869 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 FKBP1AP62942 108 aaKnown RBP17.2■□□□□ 0.34
BRAT1-201ENST00000340611 NTRK3Q16288 839 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 PACS2Q86VP3 889 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 RTN1Q16799 776 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 GOLGA6L1Q8N7Z2 621 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
BRAT1-201ENST00000340611 MPHOSPH10O00566 681 aaKnown RBP17.19■□□□□ 0.34
BRAT1-201ENST00000340611 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
BRAT1-201ENST00000340611 C11orf57Q6ZUT1 292 aaPredicted RBP17.19■□□□□ 0.34
BRAT1-201ENST00000340611 CEP95Q96GE4 821 aa17.19■□□□□ 0.34
BRAT1-201ENST00000340611 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
BRAT1-201ENST00000340611 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
BRAT1-201ENST00000340611 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
BRAT1-201ENST00000340611 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.19■□□□□ 0.34
BRAT1-201ENST00000340611 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.19■□□□□ 0.34
BRAT1-201ENST00000340611 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
BRAT1-201ENST00000340611 MYH8P13535 1937 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 GOLGA6L19H0YKK7 550 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-201ENST00000340611 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 TROAPQ12815 778 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 TTC31Q49AM3 519 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-201ENST00000340611 LRRC8AQ8IWT6 810 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
BRAT1-201ENST00000340611 FTOQ9C0B1 505 aaKnown RBP eCLIP17.18■□□□□ 0.34
BRAT1-201ENST00000340611 SHMT1P34896 483 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 GABPAQ06546 454 aa17.18■□□□□ 0.34
BRAT1-201ENST00000340611 NBPF11Q86T75 865 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms