RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 RRP12Q5JTH9 1297 aaKnown RBP22.87■■□□□ 1.25
RUNX3-202ENST00000338888 KIAA1328Q86T90 577 aa22.87■■□□□ 1.25
RUNX3-202ENST00000338888 RRP36Q96EU6 259 aaKnown RBP22.87■■□□□ 1.25
RUNX3-202ENST00000338888 TACC3Q9Y6A5 838 aa22.87■■□□□ 1.25
RUNX3-202ENST00000338888 ZNF532Q9HCE3 1301 aa22.87■■□□□ 1.25
RUNX3-202ENST00000338888 EARS2Q5JPH6 523 aaKnown RBP22.87■■□□□ 1.25
RUNX3-202ENST00000338888 CRACR2BQ8N4Y2 399 aaPredicted RBP22.87■■□□□ 1.25
RUNX3-202ENST00000338888 PIH1D3Q9NQM4 214 aaKnown RBP22.87■■□□□ 1.25
RUNX3-202ENST00000338888 VPS54Q9P1Q0 977 aa22.87■■□□□ 1.25
RUNX3-202ENST00000338888 PES1O00541 588 aaKnown RBP22.86■■□□□ 1.25
RUNX3-202ENST00000338888 MAP2K2P36507 400 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 SPAG1Q07617 926 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 JADE2Q9NQC1 790 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 FAM184BQ9ULE4 1060 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 A1BGP04217 495 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 MRPS25P82663 173 aaKnown RBP22.86■■□□□ 1.25
RUNX3-202ENST00000338888 ANKRD18AQ8IVF6 992 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 AENQ8WTP8 325 aaKnown RBP22.86■■□□□ 1.25
RUNX3-202ENST00000338888 NUP133Q8WUM0 1156 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 NELFBQ8WX92 580 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 AIDAQ96BJ3 306 aa22.86■■□□□ 1.25
RUNX3-202ENST00000338888 LUC7L2Q9Y383 392 aaKnown RBP22.86■■□□□ 1.25
RUNX3-202ENST00000338888 PAK1Q13153 545 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 LACRTQ9GZZ8 138 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 RWDD2AQ9UIY3 292 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 MYO5AQ9Y4I1 1855 aaKnown RBP22.85■■□□□ 1.25
RUNX3-202ENST00000338888 RCCD1A6NED2 376 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 EZH2Q15910 746 aaKnown RBP22.85■■□□□ 1.25
RUNX3-202ENST00000338888 WDR59Q6PJI9 974 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 POTEDQ86YR6 584 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 HDAC7Q8WUI4 952 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 CAPN7Q9Y6W3 813 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 XDHP47989 1333 aa22.85■■□□□ 1.25
RUNX3-202ENST00000338888 WNT7AO00755 349 aa22.84■■□□□ 1.25
RUNX3-202ENST00000338888 DUSP10Q9Y6W6 482 aa22.84■■□□□ 1.25
RUNX3-202ENST00000338888 KRT86O43790 486 aa22.84■■□□□ 1.25
RUNX3-202ENST00000338888 USP8P40818 1118 aa22.84■■□□□ 1.25
RUNX3-202ENST00000338888 EVA1CP58658 441 aa22.84■■□□□ 1.25
RUNX3-202ENST00000338888 TSR1Q2NL82 804 aaKnown RBP22.84■■□□□ 1.25
RUNX3-202ENST00000338888 IDEP14735 1019 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 ZNF174Q15697 407 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 GBP6Q6ZN66 633 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 STRBPQ96SI9 672 aaKnown RBP22.83■■□□□ 1.25
RUNX3-202ENST00000338888 MMP14P50281 582 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 CABP4P57796 275 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 SECISBP2LQ93073 1101 aaKnown RBP22.83■■□□□ 1.25
RUNX3-202ENST00000338888 SHISA4Q96DD7 197 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 SH3GL2Q99962 352 aa22.83■■□□□ 1.25
RUNX3-202ENST00000338888 GOLGA8KD6RF30 607 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 KRT83P78385 493 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 WTAPQ15007 396 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 ARL8AQ96BM9 186 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 NAPBQ9H115 298 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.82■■□□□ 1.24
RUNX3-202ENST00000338888 DMGDHQ9UI17 866 aaKnown RBP22.82■■□□□ 1.24
RUNX3-202ENST00000338888 MACROD2A1Z1Q3 448 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 PDE6AP16499 860 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 PSEN1P49768 467 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 PPARAQ07869 468 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 UBE3CQ15386 1083 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 IFNL3Q8IZI9 196 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 CNPY4Q8N129 248 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 MB21D1Q8N884 522 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 DNAJC7Q99615 494 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 LRRC1Q9BTT6 524 aa22.82■■□□□ 1.24
RUNX3-202ENST00000338888 EPB41L4AQ9HCS5 686 aaPredicted RBP22.82■■□□□ 1.24
RUNX3-202ENST00000338888 SCN11AQ9UI33 1791 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 hCG_1642624A0A1W2PR95 340 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 MYO1FO00160 1098 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 NDUFAB1O14561 156 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 PDCLQ13371 301 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 CCDC70Q6NSX1 233 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 EHBP1Q8NDI1 1231 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 GDAQ9Y2T3 454 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 PARP1P09874 1014 aaKnown RBP22.81■■□□□ 1.24
RUNX3-202ENST00000338888 METTL24Q5JXM2 366 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 AMOTL1Q8IY63 956 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 DCAF5Q96JK2 942 aa22.81■■□□□ 1.24
RUNX3-202ENST00000338888 H0YHG0 523 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 MATR3P43243 847 aaKnown RBP eCLIP22.8■■□□□ 1.24
RUNX3-202ENST00000338888 SLC7A5Q01650 507 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 FKBP15Q5T1M5 1219 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 MTRQ99707 1265 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 TRIM49BA6NDI0 452 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 ATP6V1AP38606 617 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 TTMPQ5BVD1 217 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 AKNAD1Q5T1N1 836 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 MFSD6Q6ZSS7 791 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 IRF2BP1Q8IU81 584 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 PRPF38AQ8NAV1 312 aaKnown RBP22.8■■□□□ 1.24
RUNX3-202ENST00000338888 FANCBQ8NB91 859 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 FERMT2Q96AC1 680 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 ABCC12Q96J65 1359 aa22.8■■□□□ 1.24
RUNX3-202ENST00000338888 OPA1O60313 960 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 PRDM1O75626 825 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 CYP27A1Q02318 531 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 TSEN2Q8NCE0 465 aaKnown RBP22.79■■□□□ 1.24
RUNX3-202ENST00000338888 CAPN11Q9UMQ6 739 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
RUNX3-202ENST00000338888 PRCPP42785 496 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms