RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DEXIO95424 95 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 MFSD6Q6ZSS7 791 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 SPATA20Q8TB22 786 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 GSDMAQ96QA5 445 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 VIPAS39Q9H9C1 493 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 JADE2Q9NQC1 790 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 SCN11AQ9UI33 1791 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 IPO7O95373 1038 aaKnown RBP15.43■□□□□ 0.06
SYNE3-201ENST00000334258 ATP1A1P05023 1023 aaKnown RBP15.43■□□□□ 0.06
SYNE3-201ENST00000334258 COPB1P53618 953 aaKnown RBP15.43■□□□□ 0.06
SYNE3-201ENST00000334258 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
SYNE3-201ENST00000334258 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
SYNE3-201ENST00000334258 PPP1R3GB7ZBB8 358 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 ERLIN2O94905 339 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 LIFRP42702 1097 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 AMPD2Q01433 879 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 ZNF174Q15697 407 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 KIF6Q6ZMV9 814 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 FAM107BQ9H098 131 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
SYNE3-201ENST00000334258 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 GOLGA6BA6NDN3 693 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 CCDC70Q6NSX1 233 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 GNL3LQ9NVN8 582 aaKnown RBP15.42■□□□□ 0.06
SYNE3-201ENST00000334258 VPS54Q9P1Q0 977 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 PDE6AP16499 860 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 XBP1P17861 261 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 TDO2P48775 406 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 MNAT1P51948 309 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 SPAG1Q07617 926 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 TTF1Q15361 905 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-201ENST00000334258 TTC19Q6DKK2 380 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-201ENST00000334258 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
SYNE3-201ENST00000334258 LUC7L2Q9Y383 392 aaKnown RBP15.42■□□□□ 0.06
SYNE3-201ENST00000334258 KCNJ18B7U540 433 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 SEMA3EO15041 775 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 KCNJ12Q14500 433 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 BCAS4Q8TDM0 211 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 JAKMIP2Q96AA8 810 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 HAUS4Q9H6D7 363 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 KAT14Q9H8E8 782 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 TRMT112Q9UI30 125 aaKnown RBP15.42■□□□□ 0.06
SYNE3-201ENST00000334258 MAP3K15Q6ZN16 1313 aa15.42■□□□□ 0.06
SYNE3-201ENST00000334258 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 CKAP4Q07065 602 aaKnown RBP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 DPYDQ12882 1025 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 MMS22LQ6ZRQ5 1243 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 CRACR2BQ8N4Y2 399 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 OR8K1Q8NGG5 319 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 SELENOOQ9BVL4 669 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 SHTN1A0MZ66 631 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 PRPF6O94906 941 aaKnown RBP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 PAK1Q13153 545 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 TRAPPC11Q7Z392 1133 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 NELFBQ8WX92 580 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 AATFQ9NY61 560 aaKnown RBP eCLIP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 ITIH6Q6UXX5 1313 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 MBD4O95243 580 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 TRIM14Q14142 442 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 DZIP3Q86Y13 1208 aaKnown RBP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
SYNE3-201ENST00000334258 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
SYNE3-201ENST00000334258 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 CDHR2Q9BYE9 1310 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 CYP19A1P11511 503 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-201ENST00000334258 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNE3-201ENST00000334258 AKNAD1Q5T1N1 836 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 STRBPQ96SI9 672 aaKnown RBP15.4■□□□□ 0.06
SYNE3-201ENST00000334258 KRT23Q9C075 422 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 ARMT1Q9H993 441 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 TTC26A0AVF1 554 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 MACROD2A1Z1Q3 448 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 IRF6O14896 467 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 ZNF185O15231 689 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 PRDM1O75626 825 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 UBE3CQ15386 1083 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 TCP11X2Q5H9J9 407 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 SND1Q7KZF4 910 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNE3-201ENST00000334258 FANCBQ8NB91 859 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 EHD4Q9H223 541 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 CNNM2Q9H8M5 875 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 FAM169AQ9Y6X4 670 aa15.4■□□□□ 0.06
SYNE3-201ENST00000334258 KRT86O43790 486 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 IRAK1P51617 712 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 MRPS25P82663 173 aaKnown RBP15.39■□□□□ 0.05
SYNE3-201ENST00000334258 ITPK1Q13572 414 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 RASSF8Q8NHQ8 419 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 RUFY1Q96T51 708 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 LIMA1Q9UHB6 759 aaKnown RBP15.39■□□□□ 0.05
SYNE3-201ENST00000334258 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 FKBP15Q5T1M5 1219 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 MAGEB6Q8N7X4 407 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 CAPS2Q9BXY5 557 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 ZNHIT6Q9NWK9 470 aaKnown RBP15.39■□□□□ 0.05
SYNE3-201ENST00000334258 REXO2Q9Y3B8 237 aaKnown RBP15.39■□□□□ 0.05
SYNE3-201ENST00000334258 H0YHG0 523 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 MYBL2P10244 700 aa15.39■□□□□ 0.05
SYNE3-201ENST00000334258 IDEP14735 1019 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms