RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TARSL2A2RTX5 802 aaKnown RBP20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 MMP1P03956 469 aa20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 LIG3P49916 1009 aa20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 DIS3L2Q8IYB7 885 aaKnown RBP20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 GPATCH11Q8N954 259 aa20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 FAM76AQ8TAV0 307 aa20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 MYL10Q9BUA6 226 aa20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 SRPRBQ9Y5M8 271 aaKnown RBP20.39■□□□□ 0.86
CLSTN3-202ENST00000331148 RGL2O15211 777 aa20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 GNPATO15228 680 aa20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 SSRP1Q08945 709 aaKnown RBP20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 RILPL1Q5EBL4 403 aa20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 MMS19Q96T76 1030 aa20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 CRACR2AQ9BSW2 395 aa20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 BCORQ6W2J9 1755 aa20.39■□□□□ 0.85
CLSTN3-202ENST00000331148 RNF225M0QZC1 329 aaPredicted RBP20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 PSMD14O00487 310 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 ADORA1P30542 326 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 CCT6AP40227 531 aaKnown RBP20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 SAFBQ15424 915 aaKnown RBP eCLIP20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 CSRNP2Q9H175 543 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 HDAC6Q9UBN7 1215 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 TRIM10Q9UDY6 481 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 PCDHB6Q9Y5E3 794 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 FAM169AQ9Y6X4 670 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 AGPSO00116 658 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 NTSR2O95665 410 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 CDC25AP30304 524 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 SCARF1Q14162 830 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 GDAP1L1Q96MZ0 367 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 GUCA1BQ9UMX6 200 aa20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 REXO2Q9Y3B8 237 aaKnown RBP20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 RTCBQ9Y3I0 505 aaKnown RBP20.38■□□□□ 0.85
CLSTN3-202ENST00000331148 B4E1Z4 1266 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 IRAK1P51617 712 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 LDHAL6AQ6ZMR3 332 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 SMYD4Q8IYR2 804 aaPredicted RBP20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 TMEM87BQ96K49 555 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 KCNJ14Q9UNX9 436 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 EBAG9O00559 213 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 ENC1O14682 589 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 ZAP70P43403 619 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 GSCP56915 257 aaPredicted RBP20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 KRT31Q15323 416 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 GSPT2Q8IYD1 628 aaKnown RBP20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 IGDCC4Q8TDY8 1250 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 WASF1Q92558 559 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 SELENOOQ9BVL4 669 aa20.37■□□□□ 0.85
CLSTN3-202ENST00000331148 GOLGA6CA6NDK9 693 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 PPP1R3GB7ZBB8 358 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 ATP1A1P05023 1023 aaKnown RBP20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 GOLGA6DP0CG33 693 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 GUCY1A2P33402 732 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 AFMP43652 599 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 TRIM14Q14142 442 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 FOXP1Q9H334 677 aaPredicted RBP20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 GOLGA6AQ9NYA3 693 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 BRWD3Q6RI45 1802 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 TAF1LQ8IZX4 1826 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 A0A087X0B3 334 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 ZMYND10O75800 440 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 CASP1P29466 404 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 MMP14P50281 582 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 SGMS1Q86VZ5 419 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 XAGE2Q96GT9 111 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 LIMA1Q9UHB6 759 aaKnown RBP20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 RIPOR2Q9Y4F9 1068 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 SAR1BQ9Y6B6 198 aa20.36■□□□□ 0.85
CLSTN3-202ENST00000331148 MYO5AQ9Y4I1 1855 aaKnown RBP20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 N4BP3O15049 544 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 ZPR1O75312 459 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 NDUFA10O95299 355 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 MYBL2P10244 700 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 HNRNPH1P31943 449 aaKnown RBP20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 PPFIA1Q13136 1202 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 SH3RF1Q7Z6J0 888 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 PAGE5Q96GU1 130 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 RPGRIP1Q96KN7 1286 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 CEP131Q9UPN4 1083 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 CTNND2Q9UQB3 1225 aa20.35■□□□□ 0.85
CLSTN3-202ENST00000331148 SRGAP2O75044 1071 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 KRT9P35527 623 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 CKAP4Q07065 602 aaKnown RBP20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 DPYDQ12882 1025 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 TMEM67Q5HYA8 995 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 KCNV1Q6PIU1 500 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 CNNM1Q9NRU3 951 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 GOLGA6BA6NDN3 693 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 NR5A1Q13285 461 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 PAPD7Q5XG87 772 aaKnown RBP20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 PI16Q6UXB8 463 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 CHP1Q99653 195 aa20.34■□□□□ 0.85
CLSTN3-202ENST00000331148 HAUS4Q9H6D7 363 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms