RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZNF112Q9UJU3 913 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 RCAN3Q9UKA8 241 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 FPGT-TNNI3KV9GXZ4 949 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 DOCK2Q92608 1830 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 MROH7-TTC4A0A0A0MT08 1334 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 GPR75-ASB3A0A0A6YYF3 556 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 TCP10L2B9ZVM9 353 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 HMMRO75330 724 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 ADD1P35611 737 aaKnown RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 CCDC158Q5M9N0 1113 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 NOL9Q5SY16 702 aaKnown RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 GORABQ5T7V8 394 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 ZNF385CQ66K41 422 aaPredicted RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 CDC42EP5Q6NZY7 148 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 DZIP1Q86YF9 867 aaKnown RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 PNMA1Q8ND90 353 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 ZNF341Q9BYN7 854 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 TMEM39BQ9GZU3 492 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 GDPD2Q9HCC8 539 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 ZBTB40Q9NUA8 1239 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 SCAF8Q9UPN6 1271 aaKnown RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 CSADQ9Y600 493 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 ATRNL1Q5VV63 1379 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 CEP350Q5VT06 3117 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 ERVH48-1M5A8F1 160 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 SURF6O75683 361 aaKnown RBP7.75□□□□□ -1.17
SMG1-201ENST00000330588 TRPA1O75762 1119 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 MCAMP43121 646 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 GTF2A2P52657 109 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 FOXD4L5Q5VV16 416 aaPredicted RBP7.75□□□□□ -1.17
SMG1-201ENST00000330588 ERO1BQ86YB8 467 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 VWA5B2Q8N398 1253 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 ABHD8Q96I13 439 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 NEUROD6Q96NK8 337 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 C1orf115Q9H7X2 142 aa7.75□□□□□ -1.17
SMG1-201ENST00000330588 FOCADQ5VW36 1801 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 RAB11FIP3O75154 756 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 PTGIRP43119 386 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 MECOMQ03112 1051 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 PPATQ06203 517 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 PPIL2Q13356 520 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 OS9Q13438 667 aaPredicted RBP7.74□□□□□ -1.17
SMG1-201ENST00000330588 VGLL4Q14135 290 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 CTU1Q7Z7A3 348 aaKnown RBP7.74□□□□□ -1.17
SMG1-201ENST00000330588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMG1-201ENST00000330588 NSUN4Q96CB9 384 aaKnown RBP7.74□□□□□ -1.17
SMG1-201ENST00000330588 CLMNQ96JQ2 1002 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 ZNF395Q9H8N7 513 aaPredicted RBP7.74□□□□□ -1.17
SMG1-201ENST00000330588 POLMQ9NP87 494 aaPredicted RBP7.74□□□□□ -1.17
SMG1-201ENST00000330588 USP40Q9NVE5 1235 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 SNCAIPQ9Y6H5 919 aa7.74□□□□□ -1.17
SMG1-201ENST00000330588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.74□□□□□ -1.17
SMG1-201ENST00000330588 GPR25O00155 361 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 ARHGEF15O94989 841 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 CETPP11597 493 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 PRKG1Q13976 671 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 TTC39AQ5SRH9 613 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 PANK1Q8TE04 598 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 OPTNQ96CV9 577 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 KIF1BPQ96EK5 621 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 WRNIP1Q96S55 665 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 ABCF2Q9UG63 623 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
SMG1-201ENST00000330588 DOCK1Q14185 1865 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 TRAK2O60296 914 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 FKTNO75072 461 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 WDHD1O75717 1129 aaPredicted RBP7.72□□□□□ -1.17
SMG1-201ENST00000330588 BTDP43251 543 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 CACNB3P54284 484 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 RHBDL3P58872 404 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 SNAPC2Q13487 334 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 RHPN1Q8TCX5 695 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 ZNF384Q8TF68 577 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 DBNDD2Q9BQY9 259 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 NOL10Q9BSC4 688 aaKnown RBP7.72□□□□□ -1.17
SMG1-201ENST00000330588 MCOLN1Q9GZU1 580 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 DHX36Q9H2U1 1008 aaKnown RBP7.72□□□□□ -1.17
SMG1-201ENST00000330588 GINM1Q9NU53 330 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 DBNLQ9UJU6 430 aaKnown RBP7.72□□□□□ -1.17
SMG1-201ENST00000330588 CASP8AP2Q9UKL3 1982 aa7.72□□□□□ -1.17
SMG1-201ENST00000330588 IGF2BP3O00425 579 aaKnown RBP eCLIP7.71□□□□□ -1.17
SMG1-201ENST00000330588 CXCL11O14625 94 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 RAD21O60216 631 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 CTNND1O60716 968 aaKnown RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 BAG3O95817 575 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 RGS19P49795 217 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 RGS3P49796 1198 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 NFIAQ12857 509 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 IRF5Q13568 498 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 DGKZQ13574 1117 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 TTF1Q15361 905 aaPredicted RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 CLASRPQ8N2M8 674 aaKnown RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 WHAMMQ8TF30 809 aa7.71□□□□□ -1.17
SMG1-201ENST00000330588 EAF2Q96CJ1 260 aaPredicted RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 OSBPL5Q9H0X9 879 aaPredicted RBP7.71□□□□□ -1.17
SMG1-201ENST00000330588 ELP3Q9H9T3 547 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms