RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 SERPINC1P01008 464 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 PSMA5P28066 241 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 E2F5Q15329 346 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 RNF187Q5TA31 235 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 MTHFD1LQ6UB35 978 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 C6orf89Q6UWU4 347 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 CCDC121Q6ZUS5 278 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 FMR1NBQ8N0W7 255 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 MIPOL1Q8TD10 442 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 ZNF473Q8WTR7 871 aaKnown RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 RUFY2Q8WXA3 655 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 ZNF396Q96N95 335 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 EHD4Q9H223 541 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 MRPL44Q9H9J2 332 aaKnown RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 LRP6O75581 1613 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 SNAP23O00161 211 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 DNAJC8O75937 253 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 MYL5Q02045 173 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 THEMIS2Q5TEJ8 643 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 TC2NQ8N9U0 490 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 RIN2Q8WYP3 895 aaPredicted RBP8.38□□□□□ -1.07
TRIM49-201ENST00000329758 MAP4K1Q92918 833 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 TSPAN18Q96SJ8 248 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 SELENOOQ9BVL4 669 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
TRIM49-201ENST00000329758 TAF5LO75529 589 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 RPSAP08865 295 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ZKSCAN1P17029 563 aaPredicted RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 FOSBP53539 338 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 SCARF1Q14162 830 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ZRSR2Q15696 482 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 EMC10Q5UCC4 262 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 KDM7AQ6ZMT4 941 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 KIRREL3Q8IZU9 778 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 NOA1Q8NC60 698 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ATL2Q8NHH9 583 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 NSMCE1Q8WV22 266 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 HSD3B7Q9H2F3 369 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 NEDD4P46934 1319 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 A0A087WWV3 80 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 GOLGA6L10A6NI86 522 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ABLIM1O14639 778 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ATP6V1G2O95670 118 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 MKRN4PQ13434 485 aaPredicted RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 TCIRG1Q13488 830 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 RIPK1Q13546 671 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 BLMHQ13867 455 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 CCDC57Q2TAC2 916 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 LACTB2Q53H82 288 aaPredicted RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 NAA16Q6N069 864 aaPredicted RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 CHST3Q7LGC8 479 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 GALNT15Q8N3T1 639 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 CUL5Q93034 780 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 ANKRD27Q96NW4 1050 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 PANX2Q96RD6 677 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 EPAS1Q99814 870 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 TSGA10Q9BZW7 698 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 YIPF3Q9GZM5 350 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 PAPOLBQ9NRJ5 636 aaKnown RBP8.37□□□□□ -1.07
TRIM49-201ENST00000329758 FAM184BQ9ULE4 1060 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
TRIM49-201ENST00000329758 A6NHS1 94 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 H3BQV1 296 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 ECEL1O95672 775 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 GHRP10912 638 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 IBSPP21815 317 aaPredicted RBP8.36□□□□□ -1.07
TRIM49-201ENST00000329758 LSP1P33241 339 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 RANBP1P43487 201 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 AMPD2Q01433 879 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
TRIM49-201ENST00000329758 APBA1Q02410 837 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 CKAP4Q07065 602 aaKnown RBP8.36□□□□□ -1.07
TRIM49-201ENST00000329758 PDCLQ13371 301 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 LRRC23Q53EV4 343 aaPredicted RBP8.36□□□□□ -1.07
TRIM49-201ENST00000329758 ANKRD20A8PQ5CZ79 823 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 ZNF569Q5MCW4 686 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 RINLQ6ZS11 566 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 HELBQ8NG08 1087 aaPredicted RBP8.36□□□□□ -1.07
TRIM49-201ENST00000329758 TBC1D5Q92609 795 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 DPF2Q92785 391 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 BRF1Q92994 677 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
TRIM49-201ENST00000329758 HAUS7Q99871 368 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms