RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 PDHBP11177 359 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 POLD1P28340 1107 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 CLEC10AQ8IUN9 316 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 FAM177A1Q8N128 213 aaPredicted RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 CPVLQ9H3G5 476 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 BARHL2Q9NY43 387 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
TPM3-205ENST00000328159 STXBP3O00186 592 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 ADAMTS3O15072 1205 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 RAD17O75943 681 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 SLURP2P0DP57 97 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 PPP4R3BQ5MIZ7 849 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 FOXP4Q8IVH2 680 aaPredicted RBP17.11■□□□□ 0.33
TPM3-205ENST00000328159 DAGLBQ8NCG7 672 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
TPM3-205ENST00000328159 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
TPM3-205ENST00000328159 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 GRIN1Q05586 938 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 GMLQ99445 158 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 FAM13BQ9NYF5 915 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 KCNH3Q9ULD8 1083 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 COL2A1P02458 1487 aaPredicted RBP17.1■□□□□ 0.33
TPM3-205ENST00000328159 ATRNL1Q5VV63 1379 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
TPM3-205ENST00000328159 ZNF165P49910 485 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 ZNF174Q15697 407 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 LUZP1Q86V48 1076 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 ANO10Q9NW15 660 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 KIAA1468Q9P260 1216 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
TPM3-205ENST00000328159 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
TPM3-205ENST00000328159 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
TPM3-205ENST00000328159 WNT7AO00755 349 aa17.09■□□□□ 0.33
TPM3-205ENST00000328159 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
TPM3-205ENST00000328159 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
TPM3-205ENST00000328159 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
TPM3-205ENST00000328159 RIOX1Q9H6W3 641 aa17.09■□□□□ 0.33
TPM3-205ENST00000328159 VAT1LQ9HCJ6 419 aa17.09■□□□□ 0.33
TPM3-205ENST00000328159 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
TPM3-205ENST00000328159 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 M0R2N6 131 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 ADCY5O95622 1261 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 SPDYE6P0CI01 402 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 CERKLQ49MI3 558 aaPredicted RBP17.08■□□□□ 0.33
TPM3-205ENST00000328159 SPECC1Q5M775 1068 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 TATDN1Q6P1N9 297 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.33
TPM3-205ENST00000328159 HOMER1Q86YM7 354 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 CCDC12Q8WUD4 166 aaPredicted RBP17.08■□□□□ 0.33
TPM3-205ENST00000328159 PIGSQ96S52 555 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 UBA5Q9GZZ9 404 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.33
TPM3-205ENST00000328159 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.32
TPM3-205ENST00000328159 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 DLGAP5Q15398 846 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 METTL16Q86W50 562 aaKnown RBP17.07■□□□□ 0.32
TPM3-205ENST00000328159 FERMT2Q96AC1 680 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 CSRNP2Q9H175 543 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 PCDHA6Q9UN73 950 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 PCDHA8Q9Y5H6 950 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 AP5Z1O43299 807 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 NAPAP54920 295 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
TPM3-205ENST00000328159 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 ZMYND12Q9H0C1 365 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
TPM3-205ENST00000328159 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
TPM3-205ENST00000328159 A0A087WWV3 80 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 hCG_1984214I3L0E3 225 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 PTGDRQ13258 359 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 ZRSR1Q15695 479 aaKnown RBP17.06■□□□□ 0.32
TPM3-205ENST00000328159 ZNF713Q8N859 430 aaPredicted RBP17.06■□□□□ 0.32
TPM3-205ENST00000328159 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 KANSL2Q9H9L4 492 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 C6orf50Q9HD87 102 aa17.06■□□□□ 0.32
TPM3-205ENST00000328159 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms