RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PHIPQ8WWQ0 1821 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 F5H6K3 240 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 GOLGA8HP0CJ92 632 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 SNHG28P0DPA3 235 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 KLRC3Q07444 240 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 NTRK3Q16288 839 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 KIAA1755Q5JYT7 1200 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 RGS22Q8NE09 1264 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 GMCL1P1Q8NEA9 526 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 RBM28Q9NW13 759 aaKnown RBP21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 SYNPO2Q9UMS6 1093 aa21.74■■□□□ 1.07
EXOSC3-201ENST00000327304 CCDC196A0A1B0GTZ2 297 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 NDUFB10O96000 172 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 KIF5BP33176 963 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 PPP2R5BQ15173 497 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 ZYXQ15942 572 aaKnown RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 SLFN13Q68D06 897 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 FRMPD2Q68DX3 1309 aaPredicted RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 TMTC3Q6ZXV5 915 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 ANKRD13AQ8IZ07 590 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 WDR18Q9BV38 432 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 GZF1Q9H116 711 aaPredicted RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 ELP3Q9H9T3 547 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 ZHX2Q9Y6X8 837 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 PALM3A6NDB9 673 aaPredicted RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 H3BQV1 296 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 PARP1P09874 1014 aaKnown RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 YY1P25490 414 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 LDLRAD1Q5T700 205 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 IFFO2Q5TF58 517 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 CNKSR2Q8WXI2 1034 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 FEZ1Q99689 392 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 ZSCAN16Q9H4T2 348 aaPredicted RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 SH2D4AQ9H788 454 aa21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 GBA2Q9HCG7 927 aaPredicted RBP21.73■■□□□ 1.07
EXOSC3-201ENST00000327304 SPP2Q13103 211 aa21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 FOXD4L6Q3SYB3 417 aaPredicted RBP21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 FOXD4L3Q6VB84 417 aaPredicted RBP21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 SPICE1Q8N0Z3 855 aa21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 CCDC82Q8N4S0 544 aa21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 PHKBQ93100 1093 aa21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 VCPKMTQ9H867 229 aa21.72■■□□□ 1.07
EXOSC3-201ENST00000327304 CDKL5O76039 1030 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 ZNF543Q08ER8 600 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 FUT2Q10981 343 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 CCDC96Q2M329 555 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 SLC35G1Q2M3R5 365 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 CST9Q5W186 159 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 CPLX2Q6PUV4 134 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 NBPF11Q86T75 865 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 SRBD1Q8N5C6 995 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 ZNF280CQ8ND82 737 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 GPT2Q8TD30 523 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 DCAF4Q8WV16 495 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 NUP88Q99567 741 aaPredicted RBP21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 AS3MTQ9HBK9 375 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 GOPCQ9HD26 462 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 CNPY2Q9Y2B0 182 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 TRIM75PA6NK02 468 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 FDPSP14324 419 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 IFNAR1P17181 557 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 NCLP19338 710 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 DGKZQ13574 1117 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 MTMR2Q13614 643 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 ASPRV1Q53RT3 343 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 KCTD1Q719H9 257 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 GMCL1Q96IK5 515 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 KIAA1683Q9H0B3 1180 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 CPVLQ9H3G5 476 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 GPCPD1Q9NPB8 672 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 ISY1Q9ULR0 285 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 TRPM7Q96QT4 1865 aa21.71■■□□□ 1.07
EXOSC3-201ENST00000327304 USP17L10C9JJH3 530 aa21.7■■□□□ 1.06
EXOSC3-201ENST00000327304 KLRF2D3W0D1 207 aa21.7■■□□□ 1.06
EXOSC3-201ENST00000327304 SLC1A4P43007 532 aa21.7■■□□□ 1.06
EXOSC3-201ENST00000327304 FKBP1BP68106 108 aa21.7■■□□□ 1.06
EXOSC3-201ENST00000327304 DNM1Q05193 864 aaKnown RBP21.7■■□□□ 1.06
EXOSC3-201ENST00000327304 AFG3L2Q9Y4W6 797 aa21.7■■□□□ 1.06
EXOSC3-201ENST00000327304 CNTNAP5Q8WYK1 1306 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 KRT85P78386 507 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 C2orf69Q8N8R5 385 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 TCHHQ07283 1943 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 PASKQ96RG2 1323 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 GNAQP50148 359 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 BACE1P56817 501 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 RESTQ13127 1097 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 TTBK2Q6IQ55 1244 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 FERMT3Q86UX7 667 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 SMC1BQ8NDV3 1235 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 SLC26A6Q9BXS9 759 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 GDPD2Q9HCC8 539 aa21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 ORC3Q9UBD5 711 aaPredicted RBP21.69■■□□□ 1.06
EXOSC3-201ENST00000327304 SPDYE5A6NIY4 337 aa21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 FMNL1O95466 1100 aaPredicted RBP21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 BMP3P12645 472 aa21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 ERO1BQ86YB8 467 aa21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 OTUD5Q96G74 571 aa21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 UBA5Q9GZZ9 404 aa21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 EMILIN3Q9NT22 766 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms