RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 NBPF14Q5TI25 921 aa9.79□□□□□ -0.84
SSBP2-201ENST00000320672 IFT74Q96LB3 600 aa9.79□□□□□ -0.84
SSBP2-201ENST00000320672 MTRF1LQ9UGC7 380 aaKnown RBP9.79□□□□□ -0.84
SSBP2-201ENST00000320672 IFT140Q96RY7 1462 aa9.79□□□□□ -0.84
SSBP2-201ENST00000320672 MYBP10242 640 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 ARID5BQ14865 1188 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 CCDC94Q9BW85 323 aaPredicted RBP9.78□□□□□ -0.84
SSBP2-201ENST00000320672 TMOD1P28289 359 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 TTBK2Q6IQ55 1244 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 HAUS1Q96CS2 278 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 PCDH11XQ9BZA7 1347 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 PCDH11YQ9BZA8 1340 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 NPATQ14207 1427 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 FLT4P35916 1363 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 NEURL1BA8MQ27 555 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 CASP2P42575 452 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 ARHGEF16Q5VV41 709 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 MIER3Q7Z3K6 550 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 BRAPQ7Z569 592 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 ZBED4O75132 1171 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 CHRNDQ07001 517 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 PABPC4Q13310 644 aaKnown RBP eCLIP9.78□□□□□ -0.844e-7■□□□□ 9.1
SSBP2-201ENST00000320672 IFNL3Q8IZI9 196 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 PPM1KQ8N3J5 372 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 MTUS1Q9ULD2 1270 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 CYP26C1Q6V0L0 522 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 KBTBD3Q8NAB2 608 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 WDR91A4D1P6 747 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 GOLGA6CA6NDK9 693 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 GOLGA6DP0CG33 693 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 ITIH3Q06033 890 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 SLC9C1Q4G0N8 1177 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 HHATQ5VTY9 493 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 VSIG1Q86XK7 387 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 RBM28Q9NW13 759 aaKnown RBP9.78□□□□□ -0.84
SSBP2-201ENST00000320672 GOLGA6AQ9NYA3 693 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 NKIRAS1Q9NYS0 192 aa9.78□□□□□ -0.84
SSBP2-201ENST00000320672 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.84
SSBP2-201ENST00000320672 PCK1P35558 622 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 ERFP50548 548 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 VPS52Q8N1B4 723 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 C19orf44Q9H6X5 657 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 SLCO1A2P46721 670 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 SCARA5Q6ZMJ2 495 aa9.77□□□□□ -0.84
SSBP2-201ENST00000320672 DENND4BO75064 1496 aaPredicted RBP9.77□□□□□ -0.84
SSBP2-201ENST00000320672 K7ENM7 598 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 IRX3P78415 501 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 HDXQ7Z353 690 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 LPIN2Q92539 896 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 LBHD1Q9BQE6 289 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 PYM1Q9BRP8 204 aaKnown RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 AZI2Q9H6S1 392 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 CC2D2AQ9P2K1 1620 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 PEX26Q7Z412 305 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 SDCCAG8Q86SQ7 713 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 ANAPC4Q9UJX5 808 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 POC1B-GALNT4F8VUJ3 575 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 FGAP02671 866 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 DENND2CQ68D51 928 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 USP37Q86T82 979 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 TBC1D31Q96DN5 1066 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 UTP11Q9Y3A2 253 aaKnown RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 TNKSO95271 1327 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 LRRIQ4A6NIV6 560 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 B4DLN1 442 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 LRRN2O75325 713 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 RASSF7Q02833 373 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 SCRN1Q12765 414 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 SKA2Q8WVK7 121 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 RPSAP08865 295 aaKnown RBP9.77□□□□□ -0.85
SSBP2-201ENST00000320672 BIRC2Q13490 618 aa9.77□□□□□ -0.85
SSBP2-201ENST00000320672 ZWINTO95229 277 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SYNDIG1LA6NDD5 238 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 HOXA13P31271 388 aaPredicted RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 NR5A1Q13285 461 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SETDB1Q15047 1291 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 NME8Q8N427 588 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 ADAM33Q9BZ11 813 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 ERFEQ4G0M1 354 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 CNGA4Q8IV77 575 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 ANKS4BQ8N8V4 417 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 ARPP21Q9UBL0 812 aaPredicted RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 GOLGA6BA6NDN3 693 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 GOLGA8SH3BPF8 625 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 GAS7O60861 476 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 BMP15O95972 392 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 RPL13P26373 211 aaKnown RBP9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SLC7A5Q01650 507 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 MESDQ14696 234 aa9.76□□□□□ -0.85
SSBP2-201ENST00000320672 SFMBT2Q5VUG0 894 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms