RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SLC4A3P48751 1232 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 PPIL2Q13356 520 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 SH3D19Q5HYK7 790 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 USP17L2Q6R6M4 530 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 NSUN7Q8NE18 718 aaKnown RBP15.83■□□□□ 0.12
PRPF18-201ENST00000320054 SLC10A4Q96EP9 437 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 C12orf42Q96LP6 360 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 RLFQ13129 1914 aa15.83■□□□□ 0.12
PRPF18-201ENST00000320054 KLRF2D3W0D1 207 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 CXCL11O14625 94 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 BMP3P12645 472 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 SLC1A4P43007 532 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 FUT2Q10981 343 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 MTMR2Q13614 643 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 STAG2Q8N3U4 1231 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 KCNH4Q9UQ05 1017 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 MTMR7Q9Y216 660 aa15.82■□□□□ 0.12
PRPF18-201ENST00000320054 TRIM75PA6NK02 468 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 WDR46O15213 610 aaKnown RBP15.81■□□□□ 0.12
PRPF18-201ENST00000320054 PLA2G6O60733 806 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 PLEKHA8P1O95397 391 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 HMGN5P82970 282 aaKnown RBP15.81■□□□□ 0.12
PRPF18-201ENST00000320054 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 KIAA1755Q5JYT7 1200 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 RASGRP2Q7LDG7 609 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 NBPF11Q86T75 865 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
PRPF18-201ENST00000320054 OPTNQ96CV9 577 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 SPZ1Q9BXG8 430 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
PRPF18-201ENST00000320054 STK36Q9NRP7 1315 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 SMC3Q9UQE7 1217 aa15.81■□□□□ 0.12
PRPF18-201ENST00000320054 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-201ENST00000320054 CNTNAP5Q8WYK1 1306 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 PTPDC1A2A3K4 754 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 RAD21O60216 631 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 FMNL1O95466 1100 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-201ENST00000320054 GOLGA8HP0CJ92 632 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 ZYXQ15942 572 aaKnown RBP15.8■□□□□ 0.12
PRPF18-201ENST00000320054 BTNL9Q6UXG8 535 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 WNK4Q96J92 1243 aa15.8■□□□□ 0.12
PRPF18-201ENST00000320054 RNF26Q9BY78 433 aaPredicted RBP15.8■□□□□ 0.12
PRPF18-201ENST00000320054 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
PRPF18-201ENST00000320054 A0A0G2JLL6 359 aaPredicted RBP15.79■□□□□ 0.12
PRPF18-201ENST00000320054 IRF6O14896 467 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 PRPF3O43395 683 aaKnown RBP15.79■□□□□ 0.12
PRPF18-201ENST00000320054 JAK2O60674 1132 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 HUNKP57058 714 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 SSRP1Q08945 709 aaKnown RBP15.79■□□□□ 0.12
PRPF18-201ENST00000320054 FAM83BQ5T0W9 1011 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 KCTD1Q719H9 257 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 PRRT2Q7Z6L0 340 aaPredicted RBP15.79■□□□□ 0.12
PRPF18-201ENST00000320054 SAPCD2Q86UD0 394 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 SPICE1Q8N0Z3 855 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 NUP88Q99567 741 aaPredicted RBP15.79■□□□□ 0.12
PRPF18-201ENST00000320054 RIOX1Q9H6W3 641 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 GPCPD1Q9NPB8 672 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 TMOD4Q9NZQ9 345 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 KIF3AQ9Y496 699 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 TLL2Q9Y6L7 1015 aa15.79■□□□□ 0.12
PRPF18-201ENST00000320054 COL11A1P12107 1806 aaPredicted RBP15.79■□□□□ 0.12
PRPF18-201ENST00000320054 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 ZBTB48P10074 688 aaPredicted RBP15.78■□□□□ 0.12
PRPF18-201ENST00000320054 FDPSP14324 419 aaKnown RBP15.78■□□□□ 0.12
PRPF18-201ENST00000320054 VCAM1P19320 739 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 GJB2P29033 226 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 GJA5P36382 358 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 HMGCS2P54868 508 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 SLC35G1Q2M3R5 365 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 TTBK2Q6IQ55 1244 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 FAM160B2Q86V87 743 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 PROCA1Q8NCQ7 364 aaPredicted RBP15.78■□□□□ 0.12
PRPF18-201ENST00000320054 CHURC1Q8WUH1 139 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 PHKBQ93100 1093 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 SLC26A6Q9BXS9 759 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 ORC3Q9UBD5 711 aaPredicted RBP15.78■□□□□ 0.12
PRPF18-201ENST00000320054 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
PRPF18-201ENST00000320054 TMEM232C9JQI7 657 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 CYTH3O43739 400 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 DEXIO95424 95 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 STAT2P52630 851 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 SNAPC2Q13487 334 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 SPRYD7Q5W111 196 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.12
PRPF18-201ENST00000320054 RGS22Q8NE09 1264 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 WASF1Q92558 559 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 HHIPL1Q96JK4 782 aa15.77■□□□□ 0.12
PRPF18-201ENST00000320054 A0A0G2JMZ2 1700 aa15.77■□□□□ 0.11
PRPF18-201ENST00000320054 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 DDIT3P35638 169 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 AKAP17AQ02040 695 aaKnown RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 SYDE2Q5VT97 1194 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 RGMBQ6NW40 437 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms