RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 TRAPPC11Q7Z392 1133 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 LPIN2Q92539 896 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 CRACR2AQ9BSW2 395 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 DCCP43146 1447 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 CHD4Q14839 1912 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 AARSP49588 968 aaKnown RBP eCLIP18.36■□□□□ 0.53
CACFD1-202ENST00000316948 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
CACFD1-202ENST00000316948 ZNF174Q15697 407 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 VIPAS39Q9H9C1 493 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 SAR1BQ9Y6B6 198 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 WNT7AO00755 349 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 SEMA3EO15041 775 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 PDE8AO60658 829 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 CCDC122Q5T0U0 273 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 SH3RF1Q7Z6J0 888 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 CAGE1Q8TC20 777 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 COG1Q8WTW3 980 aa18.36■□□□□ 0.53
CACFD1-202ENST00000316948 MYH3P11055 1940 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 KCNJ18B7U540 433 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 PRDM1O75626 825 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 MYBL2P10244 700 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 KCNJ12Q14500 433 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 E2F4Q16254 413 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 EFCAB13Q8IY85 973 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 KRT23Q9C075 422 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 CNNM2Q9H8M5 875 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 FGFR2P21802 821 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 CCT5P48643 541 aa18.35■□□□□ 0.53
CACFD1-202ENST00000316948 CT47A1Q5JQC4 288 aaPredicted RBP18.35■□□□□ 0.53
CACFD1-202ENST00000316948 LIMA1Q9UHB6 759 aaKnown RBP18.35■□□□□ 0.53
CACFD1-202ENST00000316948 ERICH2A1L162 156 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 TADA2BQ86TJ2 420 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 ANKRD20A12PQ8NF67 263 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 SMIM22K7EJ46 135 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 ZNF185O15231 689 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 GUCY2CP25092 1073 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 LIG3P49916 1009 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 TCP11X2Q5H9J9 407 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 SHISA4Q96DD7 197 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 EHD4Q9H223 541 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
CACFD1-202ENST00000316948 TTC26A0AVF1 554 aa18.33■□□□□ 0.53
CACFD1-202ENST00000316948 NELFBQ8WX92 580 aa18.33■□□□□ 0.53
CACFD1-202ENST00000316948 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.53
CACFD1-202ENST00000316948 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.53
CACFD1-202ENST00000316948 LRP6O75581 1613 aa18.33■□□□□ 0.53
CACFD1-202ENST00000316948 PAK1Q13153 545 aa18.33■□□□□ 0.52
CACFD1-202ENST00000316948 FAM76AQ8TAV0 307 aa18.33■□□□□ 0.52
CACFD1-202ENST00000316948 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.52
CACFD1-202ENST00000316948 PSMD14O00487 310 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 SLC5A1P13866 664 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 MCM3P25205 808 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 BCAMP50895 628 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 KIAA1328Q86T90 577 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 JAKMIP2Q96AA8 810 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 MYH8P13535 1937 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 XDHP47989 1333 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 GOLGA6CA6NDK9 693 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 GOLGA6DP0CG33 693 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 CYP19A1P11511 503 aaPredicted RBP18.32■□□□□ 0.52
CACFD1-202ENST00000316948 TTC19Q6DKK2 380 aaPredicted RBP18.32■□□□□ 0.52
CACFD1-202ENST00000316948 HAUS4Q9H6D7 363 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 GOLGA6AQ9NYA3 693 aa18.32■□□□□ 0.52
CACFD1-202ENST00000316948 IQSEC3Q9UPP2 1182 aaPredicted RBP18.32■□□□□ 0.52
CACFD1-202ENST00000316948 A0A087WUV0 522 aaPredicted RBP18.31■□□□□ 0.52
CACFD1-202ENST00000316948 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 AGPSO00116 658 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 EXOC5O00471 708 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 HERVK_113P62684 666 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 TRIM14Q14142 442 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 OR8K1Q8NGG5 319 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 MROH5Q6ZUA9 1318 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 MINDY4BA8MYZ0 360 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 MRPS25P82663 173 aaKnown RBP18.31■□□□□ 0.52
CACFD1-202ENST00000316948 C2orf54Q08AI8 447 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 TSR1Q2NL82 804 aaKnown RBP18.31■□□□□ 0.52
CACFD1-202ENST00000316948 SDR42E1Q8WUS8 393 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 BRMS1Q9HCU9 246 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 RWDD2AQ9UIY3 292 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 GDAQ9Y2T3 454 aa18.31■□□□□ 0.52
CACFD1-202ENST00000316948 LUC7L2Q9Y383 392 aaKnown RBP18.31■□□□□ 0.52
CACFD1-202ENST00000316948 GOLGA6BA6NDN3 693 aa18.3■□□□□ 0.52
CACFD1-202ENST00000316948 KRT2P35908 639 aa18.3■□□□□ 0.52
CACFD1-202ENST00000316948 SPAG1Q07617 926 aa18.3■□□□□ 0.52
CACFD1-202ENST00000316948 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
CACFD1-202ENST00000316948 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
CACFD1-202ENST00000316948 TRIM49BA6NDI0 452 aa18.3■□□□□ 0.52
CACFD1-202ENST00000316948 PDE2AO00408 941 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms