RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CUTAO60888 179 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 ZNF202O95125 648 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 LINGO3P0C6S8 592 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 CMA1P23946 247 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 TBX2Q13207 712 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-201ENST00000316433 SLC4A10Q6U841 1118 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 FAM114A1Q8IWE2 563 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 PLBD2Q8NHP8 589 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 RASSF8Q8NHQ8 419 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 DTNBP1Q96EV8 351 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 ESF1Q9H501 851 aaKnown RBP7.44□□□□□ -1.22
ZNF540-201ENST00000316433 SPATA7Q9P0W8 599 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 HOOK1Q9UJC3 728 aaKnown RBP7.44□□□□□ -1.22
ZNF540-201ENST00000316433 MAPK8IP1Q9UQF2 711 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 MAP3K2Q9Y2U5 619 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 MYH13Q9UKX3 1938 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 B4DLN1 442 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 BIN1O00499 593 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 KCNA6P17658 529 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 NLRP12P59046 1061 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 INF2Q27J81 1249 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 GNPTABQ3T906 1256 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 RNF187Q5TA31 235 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-201ENST00000316433 CEP57L1Q8IYX8 460 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 NGDNQ8NEJ9 315 aaKnown RBP7.44□□□□□ -1.22
ZNF540-201ENST00000316433 SPATA20Q8TB22 786 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 ZCRB1Q8TBF4 217 aaKnown RBP7.44□□□□□ -1.22
ZNF540-201ENST00000316433 MTRQ99707 1265 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 EBF2Q9HAK2 575 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 NUP98P52948 1817 aa7.44□□□□□ -1.22
ZNF540-201ENST00000316433 RIC1Q4ADV7 1423 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 A0A1B0GVG6 124 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CBFA2T2O43439 604 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 ZNF189O75820 626 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CTDNEP1O95476 244 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 NLRP6P59044 892 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 TMEM62Q0P6H9 643 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 MYBPC3Q14896 1274 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 PPP2R5BQ15173 497 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 GET4Q7L5D6 327 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 ACTR5Q9H9F9 607 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CWC25Q9NXE8 425 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CEP126Q9P2H0 1117 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 SMAPO00193 183 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CYP27B1O15528 508 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 BUB1BO60566 1050 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 NR1I2O75469 434 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CYP11B2P19099 503 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 IL15P40933 162 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 MYO1EQ12965 1108 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 PRPF4BQ13523 1007 aaKnown RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 ILDR1Q86SU0 546 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 MRPS27Q92552 414 aaKnown RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 ZCWPW1Q9H0M4 648 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 HPCAL4Q9UM19 191 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 C15orf41Q9Y2V0 281 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 RIPOR2Q9Y4F9 1068 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 ITIH6Q6UXX5 1313 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 A6NHS1 94 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 RAD21O60216 631 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 SMIM24O75264 130 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 NEXNQ0ZGT2 675 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 NCAPHQ15003 741 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 ZNF280DQ6N043 979 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 AACSQ86V21 672 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 SYCP3Q8IZU3 236 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 RIN2Q8WYP3 895 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 DCAF5Q96JK2 942 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 UTP6Q9NYH9 597 aaKnown RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 PUF60Q9UHX1 559 aaKnown RBP7.43□□□□□ -1.22
ZNF540-201ENST00000316433 TMEM98Q9Y2Y6 226 aa7.43□□□□□ -1.22
ZNF540-201ENST00000316433 A6NNZ2 444 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 RHOXF2BP0C7M4 288 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 CSB-PGBD3P0DP91 1061 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 EIF2S2P20042 333 aaKnown RBP7.42□□□□□ -1.22
ZNF540-201ENST00000316433 BLMHQ13867 455 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 TUBB8Q3ZCM7 444 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 Q4G0T1 1027 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 FOXR2Q6PJQ5 311 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 SGMS1Q86VZ5 419 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 KCTD17Q8N5Z5 321 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 LINC00301Q8NCQ3 95 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 RHOXF2Q9BQY4 288 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 NUP58Q9BVL2 599 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
ZNF540-201ENST00000316433 XPO4Q9C0E2 1151 aaKnown RBP7.42□□□□□ -1.22
ZNF540-201ENST00000316433 PPP2R2CQ9Y2T4 447 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 ZC3H4Q9UPT8 1303 aaKnown RBP7.42□□□□□ -1.22
ZNF540-201ENST00000316433 CREB3O43889 395 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 MGRN1O60291 552 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 E2F6O75461 281 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 ATP4AP20648 1035 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 FOXO4P98177 505 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 MB21D2Q8IYB1 491 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-201ENST00000316433 OGFOD1Q8N543 542 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 AOPEPQ8N6M6 819 aa7.42□□□□□ -1.22
ZNF540-201ENST00000316433 CCDC12Q8WUD4 166 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms