RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CC2D2BQ6DHV5 1058 aa21.01■□□□□ 0.95
CCDC43-201ENST00000315286 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
CCDC43-201ENST00000315286 SPC24Q8NBT2 197 aa21.01■□□□□ 0.95
CCDC43-201ENST00000315286 USP17L5A8MUK1 530 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 BMP15O95972 392 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 SLURP2P0DP57 97 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 ZNF75DP51815 510 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 RBM5P52756 815 aaKnown RBP eCLIP21■□□□□ 0.95
CCDC43-201ENST00000315286 HDLBPQ00341 1268 aaKnown RBP21■□□□□ 0.95
CCDC43-201ENST00000315286 ISM2Q6H9L7 571 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 PLA2G4DQ86XP0 818 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 BARHL2Q9NY43 387 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 STXBP3O00186 592 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 HLA-DOAP06340 250 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 TRAPPC10P48553 1259 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 PTGDRQ13258 359 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 CLEC10AQ8IUN9 316 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 FOXP4Q8IVH2 680 aaPredicted RBP21■□□□□ 0.95
CCDC43-201ENST00000315286 AOPEPQ8N6M6 819 aa21■□□□□ 0.95
CCDC43-201ENST00000315286 M0R2N6 131 aa20.99■□□□□ 0.95
CCDC43-201ENST00000315286 FOXN1O15353 648 aa20.99■□□□□ 0.95
CCDC43-201ENST00000315286 EIF6P56537 245 aaKnown RBP20.99■□□□□ 0.95
CCDC43-201ENST00000315286 MDM2Q00987 491 aaPredicted RBP20.99■□□□□ 0.95
CCDC43-201ENST00000315286 RASGRP4Q8TDF6 673 aa20.99■□□□□ 0.95
CCDC43-201ENST00000315286 MYO3BQ8WXR4 1341 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 PDHBP11177 359 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 BAG6P46379 1132 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 ATP2C1P98194 919 aaPredicted RBP20.98■□□□□ 0.95
CCDC43-201ENST00000315286 TCP10Q12799 353 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 ELOA2Q8IYF1 753 aaPredicted RBP20.98■□□□□ 0.95
CCDC43-201ENST00000315286 LRRC47Q8N1G4 583 aaKnown RBP20.98■□□□□ 0.95
CCDC43-201ENST00000315286 PDILTQ8N807 584 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 SUPT20HQ8NEM7 779 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 FERMT2Q96AC1 680 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 TTC12Q9H892 705 aaPredicted RBP20.98■□□□□ 0.95
CCDC43-201ENST00000315286 SERTAD1Q9UHV2 236 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 PPIP5K2O43314 1243 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 SMARCA1P28370 1054 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
CCDC43-201ENST00000315286 SARM1Q6SZW1 724 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 CCDC148Q8NFR7 591 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 EPSTI1Q96J88 318 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 BPIFA3Q9BQP9 254 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 UBA5Q9GZZ9 404 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 VAT1LQ9HCJ6 419 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 CLIP2Q9UDT6 1046 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 FAM198AQ9UFP1 575 aa20.98■□□□□ 0.95
CCDC43-201ENST00000315286 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 ZNF500O60304 480 aaPredicted RBP20.97■□□□□ 0.95
CCDC43-201ENST00000315286 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 SERPINA10Q9UK55 444 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 PCDHA6Q9UN73 950 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 PCDHA8Q9Y5H6 950 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 PCDHA5Q9Y5H7 936 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 C10orf71Q711Q0 1435 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 FRMPD2Q68DX3 1309 aaPredicted RBP20.97■□□□□ 0.95
CCDC43-201ENST00000315286 TTLL1O95922 423 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 MCM7P33993 719 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 GALNT17Q6IS24 598 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 DAGLBQ8NCG7 672 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 RRP36Q96EU6 259 aaKnown RBP20.97■□□□□ 0.95
CCDC43-201ENST00000315286 IDI2Q9BXS1 227 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 EHD4Q9H223 541 aa20.97■□□□□ 0.95
CCDC43-201ENST00000315286 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
CCDC43-201ENST00000315286 TTLL6Q8N841 843 aa20.96■□□□□ 0.95
CCDC43-201ENST00000315286 DNAJC18Q9H819 358 aa20.96■□□□□ 0.95
CCDC43-201ENST00000315286 VWA3AA6NCI4 1184 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 ACTN4O43707 911 aaKnown RBP20.95■□□□□ 0.94
CCDC43-201ENST00000315286 SYMPKQ92797 1274 aaKnown RBP20.95■□□□□ 0.94
CCDC43-201ENST00000315286 PIGSQ96S52 555 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 HOOK1Q9UJC3 728 aaKnown RBP20.95■□□□□ 0.94
CCDC43-201ENST00000315286 SIPA1L1O43166 1804 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 A0A087X0B3 334 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 GOLGA6L6A8MZA4 724 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 MPHOSPH10O00566 681 aaKnown RBP20.95■□□□□ 0.94
CCDC43-201ENST00000315286 SNHG28P0DPA3 235 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 POSTNQ15063 836 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 SH3BP5LQ7L8J4 393 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.95■□□□□ 0.94
CCDC43-201ENST00000315286 ZMYND12Q9H0C1 365 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 DHX36Q9H2U1 1008 aaKnown RBP20.95■□□□□ 0.94
CCDC43-201ENST00000315286 RIOX1Q9H6W3 641 aa20.95■□□□□ 0.94
CCDC43-201ENST00000315286 CCDC194A0A1B0GVG4 234 aa20.94■□□□□ 0.94
CCDC43-201ENST00000315286 FAM196BA6NMK8 535 aa20.94■□□□□ 0.94
CCDC43-201ENST00000315286 PRR29P0C7W0 189 aa20.94■□□□□ 0.94
CCDC43-201ENST00000315286 NAPAP54920 295 aa20.94■□□□□ 0.94
CCDC43-201ENST00000315286 IL17AQ16552 155 aa20.94■□□□□ 0.94
CCDC43-201ENST00000315286 DRC7Q8IY82 874 aa20.94■□□□□ 0.94
CCDC43-201ENST00000315286 FAM177A1Q8N128 213 aaPredicted RBP20.94■□□□□ 0.94
CCDC43-201ENST00000315286 SEC63Q9UGP8 760 aaKnown RBP20.94■□□□□ 0.94
CCDC43-201ENST00000315286 GREB1LQ9C091 1923 aaPredicted RBP20.94■□□□□ 0.94
CCDC43-201ENST00000315286 KCNA3P22001 575 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 ASPRV1Q53RT3 343 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 GRAMD1CQ8IYS0 662 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 C4orf32Q8N8J7 132 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 DHX58Q96C10 678 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 TDRD3Q9H7E2 651 aaKnown RBP20.93■□□□□ 0.94
CCDC43-201ENST00000315286 PI4KBQ9UBF8 816 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 MYH4Q9Y623 1939 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 DPEP1P16444 411 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms