RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ABCB6Q9NP58 842 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 GNL3LQ9NVN8 582 aaKnown RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 VPS18Q9P253 973 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 V9GY48 417 aaPredicted RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 KRT9P35527 623 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 ERVK-24P63145 666 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 ARL6IP4Q66PJ3 421 aaKnown RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 NELFBQ8WX92 580 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 BRIP1Q9BX63 1249 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 VIPAS39Q9H9C1 493 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 XDHP47989 1333 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 RREB1Q92766 1687 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 FAM205CA6NFA0 338 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 RPS6KA5O75582 802 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 LONP1P36776 959 aaKnown RBP15.6■□□□□ 0.09
MKS1-201ENST00000313863 ARHGAP25P42331 645 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 CASP8Q14790 479 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 PDXDC2PQ6P474 469 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 TMTC3Q6ZXV5 915 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 SMYD4Q8IYR2 804 aaPredicted RBP15.6■□□□□ 0.09
MKS1-201ENST00000313863 GOLGA6L1Q8N7Z2 621 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 MIGA1Q8NAN2 632 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 IPO4Q8TEX9 1081 aaKnown RBP15.6■□□□□ 0.09
MKS1-201ENST00000313863 VPS16Q9H269 839 aa15.6■□□□□ 0.09
MKS1-201ENST00000313863 A0A1W2PQC6 194 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 RHOXF2BP0C7M4 288 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 CKAP4Q07065 602 aaKnown RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 STIM1Q13586 685 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 OR8K1Q8NGG5 319 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 RHOXF2Q9BQY4 288 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 MKRN1Q9UHC7 482 aaKnown RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 EPN1Q9Y6I3 576 aaPredicted RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 BAZ2AQ9UIF9 1905 aaKnown RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 PSMD14O00487 310 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 NDUFA10O95299 355 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 RPN1P04843 607 aaKnown RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 MYL1P05976 194 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 EEF1GP26641 437 aaKnown RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 CALML3P27482 149 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 BCAMP50895 628 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 KRT83P78385 493 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 AMPD2Q01433 879 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 UBXN1Q04323 297 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 PARP10Q53GL7 1025 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 ZNF662Q6ZS27 426 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 NOC3LQ8WTT2 800 aaKnown RBP15.59■□□□□ 0.09
MKS1-201ENST00000313863 TAB2Q9NYJ8 693 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 BCL9O00512 1426 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
MKS1-201ENST00000313863 CAPN2P17655 700 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 CASP1P29466 404 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 VSNL1P62760 191 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 NOM1Q5C9Z4 860 aaKnown RBP15.58■□□□□ 0.09
MKS1-201ENST00000313863 EARS2Q5JPH6 523 aaKnown RBP15.58■□□□□ 0.09
MKS1-201ENST00000313863 WWC2Q6AWC2 1192 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 SHISA4Q96DD7 197 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 SLF1Q9BQI6 1058 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.09
MKS1-201ENST00000313863 LUC7L2Q9Y383 392 aaKnown RBP15.58■□□□□ 0.09
MKS1-201ENST00000313863 PHLPP1O60346 1717 aa15.58■□□□□ 0.09
MKS1-201ENST00000313863 PRDM1O75626 825 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 PLEKHA8P1O95397 391 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 FGRP09769 529 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 NLRP5P59047 1200 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 TROAPQ12815 778 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 CCDC102AQ96A19 550 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 RASSF4Q9H2L5 321 aa15.58■□□□□ 0.08
MKS1-201ENST00000313863 MAGEC2Q9UBF1 373 aaPredicted RBP15.58■□□□□ 0.08
MKS1-201ENST00000313863 CNTNAP5Q8WYK1 1306 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 LAMB1P07942 1786 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 A0A0U1RQJ8 604 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 TARSL2A2RTX5 802 aaKnown RBP15.57■□□□□ 0.08
MKS1-201ENST00000313863 LGALS16A8MUM7 142 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 SCG2P13521 617 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 IQCEQ6IPM2 695 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 TRAPPC11Q7Z392 1133 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 ATRIPQ8WXE1 791 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 DNAJC7Q99615 494 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 BLZF1Q9H2G9 400 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 THAP9Q9H5L6 903 aa15.57■□□□□ 0.08
MKS1-201ENST00000313863 IPO7O95373 1038 aaKnown RBP15.56■□□□□ 0.08
MKS1-201ENST00000313863 CYLC1P35663 651 aaPredicted RBP15.56■□□□□ 0.08
MKS1-201ENST00000313863 STAT6P42226 847 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 NT5C2P49902 561 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 KCNB1Q14721 858 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 SDR42E1Q8WUS8 393 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 NUP58Q9BVL2 599 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 ZNHIT6Q9NWK9 470 aaKnown RBP15.56■□□□□ 0.08
MKS1-201ENST00000313863 FAN1Q9Y2M0 1017 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 A0A1B0GUL6 1792 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 KRT86O43790 486 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 ORC4O43929 436 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 PARP1P09874 1014 aaKnown RBP15.56■□□□□ 0.08
MKS1-201ENST00000313863 AARSP49588 968 aaKnown RBP eCLIP15.56■□□□□ 0.08
MKS1-201ENST00000313863 USP14P54578 494 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 GYS2P54840 703 aa15.56■□□□□ 0.08
MKS1-201ENST00000313863 NPY5RQ15761 445 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms