RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 CALM2P0DP24 149 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 CALM3P0DP25 149 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 BMP3P12645 472 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 PDIA3P30101 505 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 HOXA7P31268 230 aaPredicted RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 SLC1A4P43007 532 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 VEGFBP49765 207 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 INHBEP58166 350 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 TREML2Q5T2D2 321 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 NUP88Q99567 741 aaPredicted RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 LARP6Q9BRS8 491 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 RPAP3Q9H6T3 665 aaPredicted RBP14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 AGTPBP1Q9UPW5 1226 aa14.78□□□□□ -0.04
CHMP2A-201ENST00000312547 PALM3A6NDB9 673 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 GOLGA8BA8MQT2 603 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 BTBD19C9JJ37 291 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 AOC2O75106 756 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 RXRAP19793 462 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 TM4SF4P48230 202 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 KIF23Q02241 960 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 FAM83BQ5T0W9 1011 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 SYNE3Q6ZMZ3 975 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 GADL1Q6ZQY3 521 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 ANKRD23Q86SG2 305 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 MICU3Q86XE3 530 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 FANCBQ8NB91 859 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 NUP133Q8WUM0 1156 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 FAM217BQ9NTX9 383 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 LIMCH1Q9UPQ0 1083 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 MTMR7Q9Y216 660 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 SLC45A1Q9Y2W3 748 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 LOC285556D6RIA3 1793 aa14.77□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L15C9J2P7 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L13C9JLJ4 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L11C9JVI0 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L18D6R9N7 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L22D6RA61 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L17D6RBQ6 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L19D6RCP7 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L20D6RJB6 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 RAD21O60216 631 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 PLA2G6O60733 806 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 PARP1P09874 1014 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 MAP2K2P36507 400 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 MCM2P49736 904 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 USP17L24Q0WX57 530 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 SREBF2Q12772 1141 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 GRM1Q13255 1194 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 ME3Q16798 604 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 BTNL9Q6UXG8 535 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 CATSPERGQ6ZRH7 1159 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 KCTD1Q719H9 257 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 RAB11FIP4Q86YS3 637 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 FAM43AQ8N2R8 423 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 PTPRFP10586 1907 aa14.76□□□□□ -0.05
CHMP2A-201ENST00000312547 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 MYH4Q9Y623 1939 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 IGF2BP3O00425 579 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 PFKFB2O60825 505 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 LARGE1O95461 756 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 GOLGA8HP0CJ92 632 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 KIF5BP33176 963 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 METAP2P50579 478 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 PPP2R5BQ15173 497 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 CCDC96Q2M329 555 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 SLC35G1Q2M3R5 365 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 TTBK2Q6IQ55 1244 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 IFNL1Q8IU54 200 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 STAG2Q8N3U4 1231 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 SNX21Q969T3 373 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 CHMP4CQ96CF2 233 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 FBXO28Q9NVF7 368 aa14.75□□□□□ -0.05
CHMP2A-201ENST00000312547 THSD7BQ9C0I4 1608 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 MYPNQ86TC9 1320 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 CDC27P30260 824 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 GNAQP50148 359 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 FUT2Q10981 343 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.051e-9■■■□□ 18.7
CHMP2A-201ENST00000312547 RTN1Q16799 776 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 TMTC3Q6ZXV5 915 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 FAM160B2Q86V87 743 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 CCDC144CPQ8IYA2 1237 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 ZSCAN31Q96LW9 406 aaPredicted RBP14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 ASCC2Q9H1I8 757 aaPredicted RBP14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 RBM28Q9NW13 759 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 FEM1BQ9UK73 627 aa14.74□□□□□ -0.05
CHMP2A-201ENST00000312547 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 PDHXO00330 501 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 PLEKHA8P1O95397 391 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms