RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CCNI2Q6ZMN8 369 aaPredicted RBP16.49■□□□□ 0.23
COL6A2-202ENST00000310645 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
COL6A2-202ENST00000310645 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
COL6A2-202ENST00000310645 GREM2Q9H772 168 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 YY1AP1Q9H869 796 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 XDHP47989 1333 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 CCDC196A0A1B0GTZ2 297 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 SPAG1Q07617 926 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 HDAC7Q8WUI4 952 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 MYCBPQ99417 103 aaPredicted RBP16.48■□□□□ 0.23
COL6A2-202ENST00000310645 NCAPGQ9BPX3 1015 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 KRT23Q9C075 422 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 ZC3H4Q9UPT8 1303 aaKnown RBP16.48■□□□□ 0.23
COL6A2-202ENST00000310645 PSMD14O00487 310 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 MEGF6O75095 1541 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
COL6A2-202ENST00000310645 SHTN1A0MZ66 631 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 RCCD1A6NED2 376 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 KRT86O43790 486 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 XBP1P17861 261 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 KRT2P35908 639 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 CKAP4Q07065 602 aaKnown RBP16.48■□□□□ 0.23
COL6A2-202ENST00000310645 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 SMCR8Q8TEV9 937 aaPredicted RBP16.48■□□□□ 0.23
COL6A2-202ENST00000310645 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
COL6A2-202ENST00000310645 GEMIN8Q9NWZ8 242 aaKnown RBP16.48■□□□□ 0.23
COL6A2-202ENST00000310645 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
COL6A2-202ENST00000310645 FECHP22830 423 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 PLIN2Q99541 437 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 SMIM22K7EJ46 135 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 MCM7P33993 719 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 PRCPP42785 496 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 TRIM14Q14142 442 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 CCDC70Q6NSX1 233 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 RWDD2AQ9UIY3 292 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 H0YHG0 523 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 INPP5BP32019 993 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 AGPAT5Q9NUQ2 364 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 SMARCAL1Q9NZC9 954 aa16.47■□□□□ 0.23
COL6A2-202ENST00000310645 ZEB2O60315 1214 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 TRIM21P19474 475 aaKnown RBP16.46■□□□□ 0.23
COL6A2-202ENST00000310645 ATP1A2P50993 1020 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
COL6A2-202ENST00000310645 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 KCTD16Q68DU8 428 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 RUFY1Q96T51 708 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 FAM107BQ9H098 131 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 DMGDHQ9UI17 866 aaKnown RBP16.46■□□□□ 0.23
COL6A2-202ENST00000310645 RIPOR2Q9Y4F9 1068 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 LRRC10BA6NIK2 292 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 CXCR5P32302 372 aa16.46■□□□□ 0.23
COL6A2-202ENST00000310645 GSG1L2A8MUP6 293 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 MST1RQ04912 1400 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 WDR59Q6PJI9 974 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 MTRQ99707 1265 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 HNRNPH1P31943 449 aaKnown RBP16.45■□□□□ 0.22
COL6A2-202ENST00000310645 KLK7P49862 253 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 KRT83P78385 493 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 PDCLQ13371 301 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 PAPD7Q5XG87 772 aaKnown RBP16.45■□□□□ 0.22
COL6A2-202ENST00000310645 FERMT2Q96AC1 680 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 LRRC1Q9BTT6 524 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
COL6A2-202ENST00000310645 ARHGAP23Q9P227 1491 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 B4DLN1 442 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 IBSPP21815 317 aaPredicted RBP16.45■□□□□ 0.22
COL6A2-202ENST00000310645 LCORLQ8N3X6 602 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 CAPN7Q9Y6W3 813 aa16.45■□□□□ 0.22
COL6A2-202ENST00000310645 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 RPN1P04843 607 aaKnown RBP16.44■□□□□ 0.22
COL6A2-202ENST00000310645 MAP3K12Q12852 859 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 CCDC96Q2M329 555 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 PIK3AP1Q6ZUJ8 805 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 KRT26Q7Z3Y9 468 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 EHD2Q9NZN4 543 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 TCRBV5S4A2TA0A5A2 114 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 TARSL2A2RTX5 802 aaKnown RBP16.44■□□□□ 0.22
COL6A2-202ENST00000310645 NDUFAB1O14561 156 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 PMS1P54277 932 aaKnown RBP16.44■□□□□ 0.22
COL6A2-202ENST00000310645 SH2D3CQ8N5H7 860 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 ARL8AQ96BM9 186 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 FAM184BQ9ULE4 1060 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 USP54Q70EL1 1684 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 ANKRD18BA2A2Z9 1011 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 CPP00450 1065 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 CYLC1P35663 651 aaPredicted RBP16.44■□□□□ 0.22
COL6A2-202ENST00000310645 DNA2P51530 1060 aa16.44■□□□□ 0.22
COL6A2-202ENST00000310645 ISCA1Q9BUE6 129 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms