RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NOC3LQ8WTT2 800 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 SDR42E1Q8WUS8 393 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 IQCDQ96DY2 449 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 BEGAINQ9BUH8 593 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 LUC7LQ9NQ29 371 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 IRAK4Q9NWZ3 460 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 CNPY2Q9Y2B0 182 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 MRPL11Q9Y3B7 192 aaKnown RBP6.78□□□□□ -1.32
SEC22A-201ENST00000309934 NDUFB9Q9Y6M9 179 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 RREB1Q92766 1687 aa6.78□□□□□ -1.32
SEC22A-201ENST00000309934 CMA1P23946 247 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 SLC1A4P43007 532 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 CDK8P49336 464 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 SCARF1Q14162 830 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 HAUS3Q68CZ6 603 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 BLIDQ8IZY5 108 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 ZNF579Q8NAF0 562 aaKnown RBP6.77□□□□□ -1.32
SEC22A-201ENST00000309934 ZDHHC15Q96MV8 337 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 SPZ1Q9BXG8 430 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 LY9Q9HBG7 655 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 LMBRD1Q9NUN5 540 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 ZNF219Q9P2Y4 722 aaPredicted RBP6.77□□□□□ -1.32
SEC22A-201ENST00000309934 RCOR1Q9UKL0 485 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 KDM3AQ9Y4C1 1321 aa6.77□□□□□ -1.32
SEC22A-201ENST00000309934 GAKO14976 1311 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ZBED4O75132 1171 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 KRT18P05783 430 aaKnown RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 LONP1P36776 959 aaKnown RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 KCNQ4P56696 695 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 TMTC3Q6ZXV5 915 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 TCEANC2Q96MN5 208 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 RTFDC1Q9BY42 306 aaPredicted RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 VEZTQ9HBM0 779 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 SAP30BPQ9UHR5 308 aaKnown RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 BTAF1O14981 1849 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 PPP1R12BO60237 982 aaPredicted RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ABCD1P33897 745 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 AP3B2Q13367 1082 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 TTC38Q5R3I4 469 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 KRT26Q7Z3Y9 468 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 EGFL6Q8IUX8 553 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ELOA2Q8IYF1 753 aaPredicted RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 NCAPGQ9BPX3 1015 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 RIOK1Q9BRS2 568 aaKnown RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 PANK2Q9BZ23 570 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 NYAP2Q9P242 653 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 PCDHA4Q9UN74 947 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 V9GY48 417 aaPredicted RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 MMP1P03956 469 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ASNSP08243 561 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 DYNLL1P63167 89 aaKnown RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ICA1Q05084 483 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 KRT79Q5XKE5 535 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 LEKR1Q6ZMV7 388 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 ILDR2Q71H61 639 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 TBC1D10CQ8IV04 446 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 SLFN12Q8IYM2 578 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 REXO1Q8N1G1 1221 aaKnown RBP6.77□□□□□ -1.33
SEC22A-201ENST00000309934 TRIM5Q9C035 493 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 NT5C3AQ9H0P0 336 aa6.77□□□□□ -1.33
SEC22A-201ENST00000309934 BICDL2A1A5D9 508 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 KLRF2D3W0D1 207 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 PRDX5P30044 214 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 CEBPZQ03701 1054 aaKnown RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 SLC39A14Q15043 492 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 DOK7Q18PE1 504 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 PI16Q6UXB8 463 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 YY1AP1Q9H869 796 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 LAMB2P55268 1798 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 MYH3P11055 1940 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 CPA1P15085 419 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 DDIT3P35638 169 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 DDR1Q08345 913 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 RESTQ13127 1097 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 EZH2Q15910 746 aaKnown RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 CFAP100Q494V2 611 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 DYDC1Q8WWB3 177 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 OSBPL5Q9H0X9 879 aaPredicted RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 ZNHIT6Q9NWK9 470 aaKnown RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 DAGLAQ9Y4D2 1042 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 MORC2Q9Y6X9 1032 aaPredicted RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 NUP98P52948 1817 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 LRP5O75197 1615 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 SYCE3A1L190 88 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 ATP2B1P20020 1258 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 CCDC144CPQ8IYA2 1237 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 CCDC24Q8N4L8 307 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 MLKLQ8NB16 471 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 ACRBPQ8NEB7 543 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 GTF3C2Q8WUA4 911 aaPredicted RBP6.76□□□□□ -1.33
SEC22A-201ENST00000309934 FAM151AQ8WW52 585 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 AMNQ9BXJ7 453 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 LRRC4BQ9NT99 713 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 MTMR7Q9Y216 660 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 BCS1LQ9Y276 419 aa6.76□□□□□ -1.33
SEC22A-201ENST00000309934 NID2Q14112 1375 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms