RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LRRC47Q8N1G4 583 aaKnown RBP24.36■■□□□ 1.49
ATG4D-201ENST00000309469 CPVLQ9H3G5 476 aa24.36■■□□□ 1.49
ATG4D-201ENST00000309469 DNAJC18Q9H819 358 aa24.36■■□□□ 1.49
ATG4D-201ENST00000309469 PIM2Q9P1W9 311 aa24.36■■□□□ 1.49
ATG4D-201ENST00000309469 STXBP3O00186 592 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 MPHOSPH10O00566 681 aaKnown RBP24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ADAMTS3O15072 1205 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 RAD17O75943 681 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 BMP15O95972 392 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ZNF165P49910 485 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 PIK3AP1Q6ZUJ8 805 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 LUZP1Q86V48 1076 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 CLEC10AQ8IUN9 316 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 CCDC148Q8NFR7 591 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 KIAA1468Q9P260 1216 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 KCNH3Q9ULD8 1083 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ATF5Q9Y2D1 282 aaPredicted RBP24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ENTPD3O75355 529 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 SNHG28P0DPA3 235 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 TRAPPC10P48553 1259 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 GRIN1Q05586 938 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 TTC38Q5R3I4 469 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 GALNT17Q6IS24 598 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 FOXP4Q8IVH2 680 aaPredicted RBP24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ERCC4Q92889 916 aaPredicted RBP24.35■■□□□ 1.49
ATG4D-201ENST00000309469 RRP36Q96EU6 259 aaKnown RBP24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ANO10Q9NW15 660 aa24.35■■□□□ 1.49
ATG4D-201ENST00000309469 ESPNB1AK53 854 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 PSMD14O00487 310 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 POLD1P28340 1107 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 ASPRV1Q53RT3 343 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 PPP4R3BQ5MIZ7 849 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 GMLQ99445 158 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 FAM13BQ9NYF5 915 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 KIF13BQ9NQT8 1826 aa24.34■■□□□ 1.49
ATG4D-201ENST00000309469 WNT7AO00755 349 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 ADCY5O95622 1261 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 ZNF174Q15697 407 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 SPECC1Q5M775 1068 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 DAGLBQ8NCG7 672 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 M0R2N6 131 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 HS1BP3Q53T59 392 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 TRIM34Q9BYJ4 488 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 UBA5Q9GZZ9 404 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 MTFR1LQ9H019 292 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 RIOX1Q9H6W3 641 aa24.33■■□□□ 1.49
ATG4D-201ENST00000309469 FRMPD2Q68DX3 1309 aaPredicted RBP24.33■■□□□ 1.48
ATG4D-201ENST00000309469 FAM196BA6NMK8 535 aa24.32■■□□□ 1.48
ATG4D-201ENST00000309469 COL4A5P29400 1685 aa24.32■■□□□ 1.48
ATG4D-201ENST00000309469 CERKLQ49MI3 558 aaPredicted RBP24.32■■□□□ 1.48
ATG4D-201ENST00000309469 TATDN1Q6P1N9 297 aa24.32■■□□□ 1.48
ATG4D-201ENST00000309469 C11orf57Q6ZUT1 292 aaPredicted RBP24.32■■□□□ 1.48
ATG4D-201ENST00000309469 VAT1LQ9HCJ6 419 aa24.32■■□□□ 1.48
ATG4D-201ENST00000309469 SEC63Q9UGP8 760 aaKnown RBP24.32■■□□□ 1.48
ATG4D-201ENST00000309469 BAZ2BQ9UIF8 2168 aaKnown RBP24.32■■□□□ 1.48
ATG4D-201ENST00000309469 ZNRF3Q9ULT6 936 aa24.32■■□□□ 1.48
ATG4D-201ENST00000309469 ATRNL1Q5VV63 1379 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 METTL16Q86W50 562 aaKnown RBP24.31■■□□□ 1.48
ATG4D-201ENST00000309469 HOMER1Q86YM7 354 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 PIGSQ96S52 555 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 CSRNP2Q9H175 543 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 HDAC9Q9UKV0 1011 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 AP5Z1O43299 807 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 LONRF3Q496Y0 759 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 NIM1KQ8IY84 436 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 CCDC12Q8WUD4 166 aaPredicted RBP24.31■■□□□ 1.48
ATG4D-201ENST00000309469 FERMT2Q96AC1 680 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 PCDHA6Q9UN73 950 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 PCDHA8Q9Y5H6 950 aa24.31■■□□□ 1.48
ATG4D-201ENST00000309469 SPDYE2BA6NHP3 402 aa24.3■■□□□ 1.48
ATG4D-201ENST00000309469 SPDYE6P0CI01 402 aa24.3■■□□□ 1.48
ATG4D-201ENST00000309469 PLCB2Q00722 1185 aa24.3■■□□□ 1.48
ATG4D-201ENST00000309469 ATP2B2Q01814 1243 aa24.3■■□□□ 1.48
ATG4D-201ENST00000309469 DALRD3Q5D0E6 543 aaKnown RBP24.3■■□□□ 1.48
ATG4D-201ENST00000309469 KRBA2Q6ZNG9 492 aa24.3■■□□□ 1.48
ATG4D-201ENST00000309469 ZMYND12Q9H0C1 365 aa24.3■■□□□ 1.48
ATG4D-201ENST00000309469 A0A087WWV3 80 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 NAPAP54920 295 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 ATP2C1P98194 919 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-201ENST00000309469 ZNF543Q08ER8 600 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 IQCB1Q15051 598 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 OGFOD1Q8N543 542 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 CNNM3Q8NE01 707 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 GPCPD1Q9NPB8 672 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 ZBTB12Q9Y330 459 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-201ENST00000309469 SIPA1L1O43166 1804 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 PSME4Q14997 1843 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 MYH8P13535 1937 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 PTGDRQ13258 359 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 DLGAP5Q15398 846 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 ZRSR1Q15695 479 aaKnown RBP24.29■■□□□ 1.48
ATG4D-201ENST00000309469 ELOA2Q8IYF1 753 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-201ENST00000309469 RASGRP4Q8TDF6 673 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 KANSL2Q9H9L4 492 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 TMOD2Q9NZR1 351 aa24.29■■□□□ 1.48
ATG4D-201ENST00000309469 COL2A1P02458 1487 aaPredicted RBP24.29■■□□□ 1.48
ATG4D-201ENST00000309469 GREB1LQ9C091 1923 aaPredicted RBP24.28■■□□□ 1.48
ATG4D-201ENST00000309469 CCDC194A0A1B0GVG4 234 aa24.28■■□□□ 1.48
ATG4D-201ENST00000309469 MKL1Q969V6 931 aa24.28■■□□□ 1.48
ATG4D-201ENST00000309469 CEP57L1Q8IYX8 460 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms