RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 MTMR7Q9Y216 660 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 IVNS1ABPQ9Y6Y0 642 aa23.32■■□□□ 1.32
VEGFB-201ENST00000309422 GREB1LQ9C091 1923 aaPredicted RBP23.31■■□□□ 1.32
VEGFB-201ENST00000309422 NMT2O60551 498 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 PLS1Q14651 629 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 SLC9C1Q4G0N8 1177 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 NCOA7Q8NI08 942 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 SOCS4Q8WXH5 440 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 NBPF3Q9H094 633 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 FEM1BQ9UK73 627 aa23.31■■□□□ 1.32
VEGFB-201ENST00000309422 REC8O95072 547 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 DSG3P32926 999 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 GMCL1Q96IK5 515 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 KAT14Q9H8E8 782 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 IL17RBQ9NRM6 502 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 HPS5Q9UPZ3 1129 aa23.3■■□□□ 1.32
VEGFB-201ENST00000309422 CYP21A2P08686 494 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 COPB2P35606 906 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 STAT2P52630 851 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 FAM160B2Q86V87 743 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 DGKHQ86XP1 1220 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 CHURC1Q8WUH1 139 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 DCAF4Q8WV16 495 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 NUP88Q99567 741 aaPredicted RBP23.29■■□□□ 1.32
VEGFB-201ENST00000309422 RBPJLQ9UBG7 517 aa23.29■■□□□ 1.32
VEGFB-201ENST00000309422 CCDC85CA6NKD9 419 aa23.28■■□□□ 1.32
VEGFB-201ENST00000309422 EIF5BO60841 1220 aaKnown RBP23.28■■□□□ 1.32
VEGFB-201ENST00000309422 ZBED4O75132 1171 aa23.28■■□□□ 1.32
VEGFB-201ENST00000309422 KIAA1755Q5JYT7 1200 aa23.28■■□□□ 1.32
VEGFB-201ENST00000309422 PRPF38AQ8NAV1 312 aaKnown RBP23.28■■□□□ 1.32
VEGFB-201ENST00000309422 KIFC2Q96AC6 838 aa23.28■■□□□ 1.32
VEGFB-201ENST00000309422 ATG4CQ96DT6 458 aa23.28■■□□□ 1.32
VEGFB-201ENST00000309422 ZSCAN10Q96SZ4 725 aaPredicted RBP23.28■■□□□ 1.32
VEGFB-201ENST00000309422 ZKSCAN3Q9BRR0 538 aa23.28■■□□□ 1.32
VEGFB-201ENST00000309422 LSG1Q9H089 658 aaKnown RBP23.28■■□□□ 1.32
VEGFB-201ENST00000309422 FDX1P10109 184 aa23.27■■□□□ 1.32
VEGFB-201ENST00000309422 ZKSCAN1P17029 563 aaPredicted RBP23.27■■□□□ 1.32
VEGFB-201ENST00000309422 PRKCZQ05513 592 aa23.27■■□□□ 1.32
VEGFB-201ENST00000309422 TMEM47Q9BQJ4 181 aa23.27■■□□□ 1.32
VEGFB-201ENST00000309422 TXNRD2Q9NNW7 524 aa23.27■■□□□ 1.32
VEGFB-201ENST00000309422 PTCH2Q9Y6C5 1203 aa23.27■■□□□ 1.32
VEGFB-201ENST00000309422 TNKSO95271 1327 aa23.27■■□□□ 1.32
VEGFB-201ENST00000309422 MCCP23508 829 aa23.27■■□□□ 1.31
VEGFB-201ENST00000309422 IFIT1BQ5T764 474 aaKnown RBP23.27■■□□□ 1.31
VEGFB-201ENST00000309422 SLAIN1Q8ND83 568 aa23.27■■□□□ 1.31
VEGFB-201ENST00000309422 NUDT12Q9BQG2 462 aa23.27■■□□□ 1.31
VEGFB-201ENST00000309422 SPATC1LQ9H0A9 340 aa23.27■■□□□ 1.31
VEGFB-201ENST00000309422 BIN2Q9UBW5 565 aaPredicted RBP23.27■■□□□ 1.31
VEGFB-201ENST00000309422 TACC3Q9Y6A5 838 aa23.27■■□□□ 1.31
VEGFB-201ENST00000309422 TMEM232C9JQI7 657 aa23.26■■□□□ 1.31
VEGFB-201ENST00000309422 E7EWF7 191 aa23.26■■□□□ 1.31
VEGFB-201ENST00000309422 CAPN15O75808 1086 aa23.26■■□□□ 1.31
VEGFB-201ENST00000309422 SLC25A27O95847 323 aa23.26■■□□□ 1.31
VEGFB-201ENST00000309422 PLEKHH3Q7Z736 793 aa23.26■■□□□ 1.31
VEGFB-201ENST00000309422 FBXO28Q9NVF7 368 aa23.26■■□□□ 1.31
VEGFB-201ENST00000309422 NOVP48745 357 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 FLT3LGP49771 235 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 RCSD1Q6JBY9 416 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 NCAPG2Q86XI2 1143 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 SHCBP1Q8NEM2 672 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 MROH8Q9H579 483 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 ZSWIM5Q9P217 1185 aa23.25■■□□□ 1.31
VEGFB-201ENST00000309422 VWA5AO00534 786 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 RGS2P41220 211 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 UBXN2AP68543 259 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 KRT32Q14532 448 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 CREB3L3Q68CJ9 461 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 GPR142Q7Z601 462 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 PNMA1Q8ND90 353 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 CHMP4CQ96CF2 233 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 TEX13BQ9BXU2 312 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 SLC5A4Q9NY91 659 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 BTBD7Q9P203 1132 aa23.24■■□□□ 1.31
VEGFB-201ENST00000309422 IFIT3O14879 490 aaKnown RBP23.23■■□□□ 1.31
VEGFB-201ENST00000309422 SLC27A2O14975 620 aa23.23■■□□□ 1.31
VEGFB-201ENST00000309422 CTGFP29279 349 aa23.23■■□□□ 1.31
VEGFB-201ENST00000309422 IRF5Q13568 498 aa23.23■■□□□ 1.31
VEGFB-201ENST00000309422 GPATCH4Q5T3I0 446 aaKnown RBP23.23■■□□□ 1.31
VEGFB-201ENST00000309422 KCTD1Q719H9 257 aa23.23■■□□□ 1.31
VEGFB-201ENST00000309422 PORCNQ9H237 461 aa23.23■■□□□ 1.31
VEGFB-201ENST00000309422 MYH4Q9Y623 1939 aa23.23■■□□□ 1.31
VEGFB-201ENST00000309422 CNMDO75829 334 aa23.22■■□□□ 1.31
VEGFB-201ENST00000309422 GRK4P32298 578 aa23.22■■□□□ 1.31
VEGFB-201ENST00000309422 TRMT44Q8IYL2 757 aaKnown RBP23.22■■□□□ 1.31
VEGFB-201ENST00000309422 ENAHQ8N8S7 591 aaPredicted RBP23.22■■□□□ 1.31
VEGFB-201ENST00000309422 MOV10L1Q9BXT6 1211 aaKnown RBP23.22■■□□□ 1.31
VEGFB-201ENST00000309422 ADCY3O60266 1144 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 PLA2G6O60733 806 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 ERCC3P19447 782 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 MCM5P33992 734 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 STAT3P40763 770 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 OAZ1P54368 228 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 WTAPQ15007 396 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 Q3C1V9 767 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 PNMA2Q9UL42 364 aa23.21■■□□□ 1.31
VEGFB-201ENST00000309422 STRNO43815 780 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 PEX10O60683 326 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 PDHBP11177 359 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms