RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 PCDHA12Q9UN75 941 aa22.92■■□□□ 1.26
SH3RF3-201ENST00000309415 LEMD3Q9Y2U8 911 aa22.92■■□□□ 1.26
SH3RF3-201ENST00000309415 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
SH3RF3-201ENST00000309415 CCDC160A6NGH7 325 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 INTS8Q75QN2 995 aaKnown RBP22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 MAPKBP1O60336 1514 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 TECP42680 631 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 IFRD2Q12894 506 aaPredicted RBP22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 DDX25Q9UHL0 483 aaKnown RBP22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 GOLGA6CA6NDK9 693 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 GOLGA6BA6NDN3 693 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 GOLGA6DP0CG33 693 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 GOLGA8HP0CJ92 632 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 USP14P54578 494 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 RSPH3Q86UC2 560 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 GOLGA6AQ9NYA3 693 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 MAGEA1P43355 309 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 CCDC84Q86UT8 332 aaPredicted RBP22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 GOLGA5Q8TBA6 731 aa22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.91■■□□□ 1.26
SH3RF3-201ENST00000309415 CEP104O60308 925 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 LGSNQ5TDP6 509 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 DAAM2Q86T65 1068 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 CACYBPQ9HB71 228 aaKnown RBP22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 SLC12A2P55011 1212 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 KRT81Q14533 505 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 ABI1Q8IZP0 508 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 RPS6KC1Q96S38 1066 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 NUCKS1Q9H1E3 243 aaKnown RBP22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 DMP1Q13316 513 aaPredicted RBP22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 TRIM50Q86XT4 487 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 MAIP1Q8WWC4 291 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 STAMQ92783 540 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 PLXNC1O60486 1568 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 CIB2O75838 187 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 PPP2R3AQ06190 1150 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 CSRNP1Q96S65 589 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 TRIM31Q9BZY9 425 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 SEMA3EO15041 775 aa22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 MAPK8IP2Q13387 824 aaPredicted RBP22.9■■□□□ 1.26
SH3RF3-201ENST00000309415 NOL3O60936 208 aaKnown RBP22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 TFDP1Q14186 410 aa22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 GPIHBP1Q8IV16 184 aa22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 CMTR1Q8N1G2 835 aaKnown RBP22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 NBPF11Q86T75 865 aa22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 FAM76AQ8TAV0 307 aa22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 CCDC94Q9BW85 323 aaPredicted RBP22.89■■□□□ 1.26
SH3RF3-201ENST00000309415 XRCC5P13010 732 aaKnown RBP22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 CAPN2P17655 700 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 FAM173BQ6P4H8 233 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 NPC1L1Q9UHC9 1359 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 NEK8Q86SG6 692 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 LSM14BQ9BX40 385 aaKnown RBP22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 SWAP70Q9UH65 585 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 TNKSO95271 1327 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 KDM2BQ8NHM5 1336 aa22.89■■□□□ 1.25
SH3RF3-201ENST00000309415 DDAH1O94760 285 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 VIMP08670 466 aaKnown RBP22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 MYOCDQ8IZQ8 938 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 HESX1Q9UBX0 185 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 STAM2O75886 525 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 HDXQ7Z353 690 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 NOC2LQ9Y3T9 749 aaKnown RBP22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 GALNT17Q6IS24 598 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 SCYL2Q6P3W7 929 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 TMTC1Q8IUR5 882 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 EDC3Q96F86 508 aaKnown RBP22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 GREM2Q9H772 168 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 CCDC105Q8IYK2 499 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 IL17REQ8NFR9 667 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 ZBTB9Q96C00 473 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 C1orf112Q9NSG2 853 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 NFE2L3Q9Y4A8 694 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 LRRIQ4A6NIV6 560 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 JAK2O60674 1132 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 TMEM191BP0C7N4 346 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 MNAT1P51948 309 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 TUBB2AQ13885 445 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 TUBB2BQ9BVA1 445 aa22.88■■□□□ 1.25
SH3RF3-201ENST00000309415 SPDYE16A6NNV3 312 aaPredicted RBP22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 N4BP1O75113 896 aaKnown RBP22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 SPDYE2Q495Y8 402 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 LRRC24Q50LG9 513 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 LRFN2Q9ULH4 789 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 PEX26Q7Z412 305 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 IFT20Q8IY31 132 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 FANCBQ8NB91 859 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 NEO1Q92859 1461 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 BSPRYQ5W0U4 402 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 PANK4Q9NVE7 773 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 SERTAD1Q9UHV2 236 aa22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 ABT1Q9ULW3 272 aaKnown RBP22.87■■□□□ 1.25
SH3RF3-201ENST00000309415 IL6STP40189 918 aaPredicted RBP22.86■■□□□ 1.25
SH3RF3-201ENST00000309415 CCDC17Q96LX7 622 aa22.86■■□□□ 1.25
SH3RF3-201ENST00000309415 CDC37L1Q7L3B6 337 aa22.86■■□□□ 1.25
SH3RF3-201ENST00000309415 OR52Z1P0C646 297 aa22.86■■□□□ 1.25
SH3RF3-201ENST00000309415 RRAGAQ7L523 313 aa22.86■■□□□ 1.25
SH3RF3-201ENST00000309415 GPKOWQ92917 476 aaPredicted RBP eCLIP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms