RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 PIBF1Q8WXW3 757 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
KRT28-201ENST00000306658 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
KRT28-201ENST00000306658 SH3GLB2Q9NR46 395 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 VPS54Q9P1Q0 977 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
KRT28-201ENST00000306658 SPATA32Q96LK8 384 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 RIOX1Q9H6W3 641 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 GINM1Q9NU53 330 aa20.22■□□□□ 0.83
KRT28-201ENST00000306658 SEC63Q9UGP8 760 aaKnown RBP20.22■□□□□ 0.83
KRT28-201ENST00000306658 FRMPD2Q68DX3 1309 aaPredicted RBP20.22■□□□□ 0.83
KRT28-201ENST00000306658 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 F5H6K3 240 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 RAD21O60216 631 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 SLC1A4P43007 532 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 KLRC3Q07444 240 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 KLHL40Q2TBA0 621 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 NBPF12Q5TAG4 269 aaPredicted RBP20.21■□□□□ 0.83
KRT28-201ENST00000306658 MYSM1Q5VVJ2 828 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 FAM177A1Q8N128 213 aaPredicted RBP20.21■□□□□ 0.83
KRT28-201ENST00000306658 L3MBTL3Q96JM7 780 aaPredicted RBP20.21■□□□□ 0.83
KRT28-201ENST00000306658 GPCPD1Q9NPB8 672 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 ELP1O95163 1332 aa20.21■□□□□ 0.83
KRT28-201ENST00000306658 MBD3O95983 291 aa20.2■□□□□ 0.82
KRT28-201ENST00000306658 SLC35G1Q2M3R5 365 aa20.2■□□□□ 0.82
KRT28-201ENST00000306658 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
KRT28-201ENST00000306658 UBA5Q9GZZ9 404 aa20.2■□□□□ 0.82
KRT28-201ENST00000306658 SH2D4AQ9H788 454 aa20.2■□□□□ 0.82
KRT28-201ENST00000306658 MYH15Q9Y2K3 1946 aa20.2■□□□□ 0.82
KRT28-201ENST00000306658 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 CTNND1O60716 968 aaKnown RBP20.19■□□□□ 0.82
KRT28-201ENST00000306658 NLRP5P59047 1200 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 UBE2HP62256 183 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 LEO1Q8WVC0 666 aaPredicted RBP20.19■□□□□ 0.82
KRT28-201ENST00000306658 DCPSQ96C86 337 aaKnown RBP20.19■□□□□ 0.82
KRT28-201ENST00000306658 GMCL1Q96IK5 515 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 ZNF341Q9BYN7 854 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 VAT1LQ9HCJ6 419 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 TMX2Q9Y320 296 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 GLTPD2A6NH11 291 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 CALML3P27482 149 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 KRT2P35908 639 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 SUPT20HL1Q3ZLR7 823 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 CPVLQ9H3G5 476 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 GOPCQ9HD26 462 aa20.19■□□□□ 0.82
KRT28-201ENST00000306658 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
KRT28-201ENST00000306658 A0A1W2PRG0 241 aa20.18■□□□□ 0.82
KRT28-201ENST00000306658 USP50Q70EL3 339 aaPredicted RBP20.18■□□□□ 0.82
KRT28-201ENST00000306658 KCTD1Q719H9 257 aa20.18■□□□□ 0.82
KRT28-201ENST00000306658 HOMER1Q86YM7 354 aa20.18■□□□□ 0.82
KRT28-201ENST00000306658 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
KRT28-201ENST00000306658 USP28Q96RU2 1077 aa20.18■□□□□ 0.82
KRT28-201ENST00000306658 BARHL2Q9NY43 387 aa20.18■□□□□ 0.82
KRT28-201ENST00000306658 RTEL1Q9NZ71 1219 aa20.18■□□□□ 0.82
KRT28-201ENST00000306658 hCG_1984214I3L0E3 225 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 NDUFB10O96000 172 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 CEBPZQ03701 1054 aaKnown RBP20.17■□□□□ 0.82
KRT28-201ENST00000306658 GALNT17Q6IS24 598 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 HEATR3Q7Z4Q2 680 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 ADGRF4Q8IZF3 695 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 ZNF713Q8N859 430 aaPredicted RBP20.17■□□□□ 0.82
KRT28-201ENST00000306658 SHISA4Q96DD7 197 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 PIGSQ96S52 555 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 POLR3EQ9NVU0 708 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 RCOR1Q9UKL0 485 aa20.17■□□□□ 0.82
KRT28-201ENST00000306658 GOLGA6L4A6NEF3 574 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 GADD45BO75293 160 aaPredicted RBP20.16■□□□□ 0.82
KRT28-201ENST00000306658 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
KRT28-201ENST00000306658 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
KRT28-201ENST00000306658 POLR2AP24928 1970 aaKnown RBP20.16■□□□□ 0.82
KRT28-201ENST00000306658 BMP3P12645 472 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 ECE1P42892 770 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 NR5A1Q13285 461 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 TTBK2Q6IQ55 1244 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 SULF1Q8IWU6 871 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 GPT2Q8TD30 523 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 ACER1Q8TDN7 264 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 OXER1Q8TDS5 423 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 JMJD4Q9H9V9 463 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
KRT28-201ENST00000306658 PNMA6FA0A0J9YX94 578 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 STXBP3O00186 592 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 SOCS7O14512 581 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 EPHX2P34913 555 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 SLC16A2P36021 539 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 RILPL1Q5EBL4 403 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 PRAMEF18Q5VWM3 479 aa20.15■□□□□ 0.82
KRT28-201ENST00000306658 ZC3H15Q8WU90 426 aaKnown RBP20.15■□□□□ 0.82
KRT28-201ENST00000306658 IQCA1LA6NCM1 817 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 YEATS4O95619 227 aa20.14■□□□□ 0.81
KRT28-201ENST00000306658 NASPP49321 788 aaPredicted RBP20.14■□□□□ 0.81
KRT28-201ENST00000306658 NAPAP54920 295 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms