RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 FAM207AQ9NSI2 230 aaPredicted RBP17.67■□□□□ 0.42
USP42-201ENST00000306177 PCDHA7Q9UN72 937 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 ATP10DQ9P241 1426 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 GPBP1Q86WP2 473 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 IWS1Q96ST2 819 aa17.67■□□□□ 0.42
USP42-201ENST00000306177 NDC80O14777 642 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 TECP42680 631 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 PRKG1Q13976 671 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 MIER3Q7Z3K6 550 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 C2CD5Q86YS7 1000 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 MYOCDQ8IZQ8 938 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 PKP1Q13835 747 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 CLUL1Q15846 466 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 KRBA2Q6ZNG9 492 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 FAM204AQ9H8W3 233 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 ZNF408Q9H9D4 720 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 AS3MTQ9HBK9 375 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 NOD1Q9Y239 953 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 KCNJ18B7U540 433 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 CEP104O60308 925 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 ALDH3A1P30838 453 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 SCNN1DP51172 638 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 KCNJ12Q14500 433 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 RRAGAQ7L523 313 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 OTUD6AQ7L8S5 288 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 SLFN12Q8IYM2 578 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 SEC31BQ9NQW1 1179 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 PCDHA12Q9UN75 941 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
USP42-201ENST00000306177 CERKLQ49MI3 558 aaPredicted RBP17.66■□□□□ 0.42
USP42-201ENST00000306177 LRRC47Q8N1G4 583 aaKnown RBP17.66■□□□□ 0.42
USP42-201ENST00000306177 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
USP42-201ENST00000306177 FBXO18Q8NFZ0 1043 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 ATG3Q9NT62 314 aa17.66■□□□□ 0.42
USP42-201ENST00000306177 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 GINS2Q9Y248 185 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 XDHP47989 1333 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 MORC3Q14149 939 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 PIGBQ92521 554 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 CYP21A2P08686 494 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 SETDB1Q15047 1291 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 MYRIPQ8NFW9 859 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 GPKOWQ92917 476 aaPredicted RBP eCLIP17.65■□□□□ 0.42
USP42-201ENST00000306177 RRAGDQ9NQL2 400 aaPredicted RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 UNC13BO14795 1591 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 H7C1D1 291 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 PTPN12Q05209 780 aaKnown RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 RPS6KA1Q15418 735 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 PRR16Q569H4 304 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
USP42-201ENST00000306177 PCDHB13Q9Y5F0 798 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 CDC42BPGQ6DT37 1551 aa17.65■□□□□ 0.42
USP42-201ENST00000306177 E7EVH7 732 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
USP42-201ENST00000306177 GAS8O95995 478 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
USP42-201ENST00000306177 CFAP221Q4G0U5 840 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 AFAP1L1Q8TED9 768 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
USP42-201ENST00000306177 LEMD3Q9Y2U8 911 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
USP42-201ENST00000306177 ICA1Q05084 483 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 ELF2Q15723 593 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 NLRC4Q9NPP4 1024 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 ADKP55263 362 aaKnown RBP17.64■□□□□ 0.41
USP42-201ENST00000306177 DCUN1D2Q6PH85 259 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 ERVV-1B6SEH8 477 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 POLR2MP0CAP2 368 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 OR8K1Q8NGG5 319 aa17.64■□□□□ 0.41
USP42-201ENST00000306177 GLI2P10070 1586 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 PEX26Q7Z412 305 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 FBXO11Q86XK2 927 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 TRIM7Q9C029 511 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 SERPINA10Q9UK55 444 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
USP42-201ENST00000306177 MICALL1Q8N3F8 863 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 RAB3IL1Q8TBN0 382 aa17.63■□□□□ 0.41
USP42-201ENST00000306177 LSM14BQ9BX40 385 aaKnown RBP17.63■□□□□ 0.41
USP42-201ENST00000306177 A0A1W2PQ27 194 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms