RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PGBD1Q96JS3 809 aa14.68□□□□□ -0.06
TRIM56-201ENST00000306085 TYW1Q9NV66 732 aaKnown RBP14.68□□□□□ -0.06
TRIM56-201ENST00000306085 COX16Q9P0S2 106 aa14.68□□□□□ -0.06
TRIM56-201ENST00000306085 COPG1Q9Y678 874 aaKnown RBP14.68□□□□□ -0.06
TRIM56-201ENST00000306085 METTL14Q9HCE5 456 aaKnown RBP14.68□□□□□ -0.06
TRIM56-201ENST00000306085 ZKSCAN8Q15776 578 aaPredicted RBP14.67□□□□□ -0.06
TRIM56-201ENST00000306085 UBN1Q9NPG3 1134 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 NMIQ13287 307 aaPredicted RBP14.67□□□□□ -0.06
TRIM56-201ENST00000306085 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
TRIM56-201ENST00000306085 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 PI4KAP2A4QPH2 592 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 GLE1Q53GS7 698 aaKnown RBP14.67□□□□□ -0.06
TRIM56-201ENST00000306085 PI4KAP1Q8N8J0 262 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 PICK1Q9NRD5 415 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 MKL2Q9ULH7 1088 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 SKIP12755 728 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 ATF2P15336 505 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 M0QZ92 97 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 SLMAPQ14BN4 828 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 RRAGAQ7L523 313 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 TTC30BQ8N4P2 665 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 TAF11Q15544 211 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 NELFBQ8WX92 580 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 PLCG2P16885 1265 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 TAB2Q9NYJ8 693 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 TMOD4Q9NZQ9 345 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 GNAT2P19087 354 aa14.67□□□□□ -0.06
TRIM56-201ENST00000306085 NBNO60934 754 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 IFNAR2P48551 515 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 DDX42Q86XP3 938 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 ESYT1Q9BSJ8 1104 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 hCG_2014768A0A024R1R8 64 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 EXOC3O60645 756 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 ARMC9Q7Z3E5 817 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 UHMK1Q8TAS1 419 aaKnown RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 ZFYVE19Q96K21 471 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 TSC22D3Q99576 134 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 ABCC11Q96J66 1382 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 TMTC1Q8IUR5 882 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 CNPY4Q8N129 248 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 ENAHQ8N8S7 591 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 PPP1R2P41236 205 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 CCDC197Q8NCU1 140 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 U2AF1L4Q8WU68 220 aaKnown RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 POC1B-GALNT4F8VUJ3 575 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 INHBAP08476 426 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 ZC3H18Q86VM9 953 aaKnown RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 SYTL2Q9HCH5 934 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 FAM207AQ9NSI2 230 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 PACSIN2Q9UNF0 486 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 YWHAGP61981 247 aaKnown RBP eCLIP14.66□□□□□ -0.063e-6■■□□□ 14.4
TRIM56-201ENST00000306085 ST13P4Q8IZP2 240 aaPredicted RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 DYDC2Q96IM9 177 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 KIF17Q9P2E2 1029 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 RINT1Q6NUQ1 792 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 LSM14BQ9BX40 385 aaKnown RBP14.66□□□□□ -0.06
TRIM56-201ENST00000306085 COG4Q9H9E3 785 aa14.66□□□□□ -0.06
TRIM56-201ENST00000306085 PSMC1P62191 440 aaKnown RBP14.65□□□□□ -0.06
TRIM56-201ENST00000306085 MRPS15P82914 257 aaKnown RBP14.65□□□□□ -0.06
TRIM56-201ENST00000306085 OCA2Q04671 838 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 KCTD16Q68DU8 428 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 METTL13Q8N6R0 699 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 STRIP2Q9ULQ0 834 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 CARSP49589 748 aaKnown RBP14.65□□□□□ -0.06
TRIM56-201ENST00000306085 MAGED2Q9UNF1 606 aaPredicted RBP14.65□□□□□ -0.06
TRIM56-201ENST00000306085 IL9RQ01113 521 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 GOLGA5Q8TBA6 731 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 KLHL29Q96CT2 875 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 KIFC3Q9BVG8 833 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 CREB3O43889 395 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 PRPSAP1Q14558 356 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 PIK3AP1Q6ZUJ8 805 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 WARS2Q9UGM6 360 aaKnown RBP14.65□□□□□ -0.06
TRIM56-201ENST00000306085 KCNH3Q9ULD8 1083 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 MAGEA1P43355 309 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 PDXDC1Q6P996 788 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 FLCNQ8NFG4 579 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 RAPGEF5Q92565 580 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 TRIM8Q9BZR9 551 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 DPH5Q9H2P9 285 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 ANGPTL2Q9UKU9 493 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 NPHP3Q7Z494 1330 aa14.65□□□□□ -0.06
TRIM56-201ENST00000306085 KDM1AO60341 852 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 UBE3AQ05086 875 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 DDX28Q9NUL7 540 aaKnown RBP14.64□□□□□ -0.07
TRIM56-201ENST00000306085 TRAPPC10P48553 1259 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 AK2P54819 239 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 PDE1BQ01064 536 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 GRAMD1BQ3KR37 738 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 CDKL2Q92772 493 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 POTEB3A0JP26 581 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 HIF1AQ16665 826 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 POTEBQ6S5H4 581 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
TRIM56-201ENST00000306085 ZNF75DP51815 510 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
TRIM56-201ENST00000306085 RNF207Q6ZRF8 634 aa14.64□□□□□ -0.07
TRIM56-201ENST00000306085 MAML1Q92585 1016 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms