RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 RAB30Q15771 203 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 ABRAQ8N0Z2 381 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 TMEM199Q8N511 208 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 DBNDD2Q9BQY9 259 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 PBX4Q9BYU1 374 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 PIH1D3Q9NQM4 214 aaKnown RBP12.27□□□□□ -0.45
COL4A3-201ENST00000304990 NRBP1Q9UHY1 535 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 CNPY2Q9Y2B0 182 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 HCN4Q9Y3Q4 1203 aa12.27□□□□□ -0.45
COL4A3-201ENST00000304990 COL11A1P12107 1806 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-201ENST00000304990 SPTBN5Q9NRC6 3674 aaKnown RBP12.27□□□□□ -0.45
COL4A3-201ENST00000304990 IGSF3O75054 1194 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 SLC25A27O95847 323 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 ACLYP53396 1101 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 SLFN5Q08AF3 891 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 MTX1Q13505 466 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
COL4A3-201ENST00000304990 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 MFSD5Q6N075 450 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 MAGEB6Q8N7X4 407 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 TOX2Q96NM4 488 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
COL4A3-201ENST00000304990 MTIF3Q9H2K0 278 aaKnown RBP12.26□□□□□ -0.45
COL4A3-201ENST00000304990 SLC28A3Q9HAS3 691 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 MROH7Q68CQ1 1323 aa12.26□□□□□ -0.45
COL4A3-201ENST00000304990 LAMA2P24043 3122 aaKnown RBP12.25□□□□□ -0.45
COL4A3-201ENST00000304990 GNAI2P04899 355 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 PGK2P07205 417 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 SHMT1P34896 483 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 PLCD1P51178 756 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 AAK1Q2M2I8 961 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 PSRC1Q6PGN9 363 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-201ENST00000304990 ANKRD33Q7Z3H0 272 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-201ENST00000304990 ATG4CQ96DT6 458 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 GLT1D1Q96MS3 346 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 SH2D4AQ9H788 454 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
COL4A3-201ENST00000304990 PRUNE2Q8WUY3 3088 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 CDH23Q9H251 3354 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 A0A1W2PRG0 241 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 MOXD2PA6NHM9 499 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 TLR3O15455 904 aaKnown RBP12.24□□□□□ -0.45
COL4A3-201ENST00000304990 RAD21O60216 631 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 ACRP10323 421 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 CSF2RAP15509 400 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 TAL1P17542 331 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-201ENST00000304990 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 TMEM240Q5SV17 173 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 ZNF365Q70YC5 407 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 SPICE1Q8N0Z3 855 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 NECAB3Q96P71 396 aaPredicted RBP12.24□□□□□ -0.45
COL4A3-201ENST00000304990 NKX2-4Q9H2Z4 354 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 FAM184BQ9ULE4 1060 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
COL4A3-201ENST00000304990 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 ADGRE1Q14246 886 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 TMEM132BQ14DG7 1078 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 KCNA10Q16322 511 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 TMEM179Q6ZVK1 233 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 SPC25Q9HBM1 224 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
COL4A3-201ENST00000304990 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-201ENST00000304990 DIS3Q9Y2L1 958 aaKnown RBP12.23□□□□□ -0.45
COL4A3-201ENST00000304990 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
COL4A3-201ENST00000304990 ADAMTS4O75173 837 aa12.22□□□□□ -0.45
COL4A3-201ENST00000304990 C6orf222P0C671 652 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-201ENST00000304990 ZNF865P0CJ78 1059 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-201ENST00000304990 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
COL4A3-201ENST00000304990 PCSK9Q8NBP7 692 aaKnown RBP12.22□□□□□ -0.45
COL4A3-201ENST00000304990 DDX11Q96FC9 970 aa12.22□□□□□ -0.45
COL4A3-201ENST00000304990 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-201ENST00000304990 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
COL4A3-201ENST00000304990 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
COL4A3-201ENST00000304990 TBX21Q9UL17 535 aa12.22□□□□□ -0.45
COL4A3-201ENST00000304990 ROBO3Q96MS0 1386 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 ELP1O95163 1332 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 MYO9BQ13459 2157 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-201ENST00000304990 WDR46O15213 610 aaKnown RBP12.21□□□□□ -0.45
COL4A3-201ENST00000304990 SURF6O75683 361 aaKnown RBP12.21□□□□□ -0.45
COL4A3-201ENST00000304990 FGBP02675 491 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 CT47B1P0C2W7 299 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-201ENST00000304990 COPB2P35606 906 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 STAT3P40763 770 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 ICA1Q05084 483 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 ZNF792Q3KQV3 632 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 PPP2R2DQ66LE6 453 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 C16orf59Q7L2K0 433 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 RIOX2Q8IUF8 465 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-201ENST00000304990 IL23AQ9NPF7 189 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 TTC28Q96AY4 2481 aa12.21□□□□□ -0.45
COL4A3-201ENST00000304990 ARVCFO00192 962 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms