RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CHRNA5P30532 468 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 SCNN1DP51172 638 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 ASPRV1Q53RT3 343 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 METTL16Q86W50 562 aaKnown RBP22.2■■□□□ 1.14
HOXC4-201ENST00000303406 CCDC17Q96LX7 622 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 PYM1Q9BRP8 204 aaKnown RBP22.2■■□□□ 1.14
HOXC4-201ENST00000303406 TRIM5Q9C035 493 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 SCN9AQ15858 1988 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 IKBKBO14920 756 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 SNHG28P0DPA3 235 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 MDM2Q00987 491 aaPredicted RBP22.19■■□□□ 1.14
HOXC4-201ENST00000303406 GRIN1Q05586 938 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 DPCR1Q3MIW9 517 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 NT5DC1Q5TFE4 455 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 ARL6IP4Q66PJ3 421 aaKnown RBP22.19■■□□□ 1.14
HOXC4-201ENST00000303406 WWC2Q6AWC2 1192 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 CSRNP2Q9H175 543 aa22.19■■□□□ 1.14
HOXC4-201ENST00000303406 COL2A1P02458 1487 aaPredicted RBP22.19■■□□□ 1.14
HOXC4-201ENST00000303406 ATP2B1P20020 1258 aa22.18■■□□□ 1.14
HOXC4-201ENST00000303406 SHMT1P34896 483 aa22.18■■□□□ 1.14
HOXC4-201ENST00000303406 PIK3AP1Q6ZUJ8 805 aa22.18■■□□□ 1.14
HOXC4-201ENST00000303406 RIOX1Q9H6W3 641 aa22.18■■□□□ 1.14
HOXC4-201ENST00000303406 ESYT2A0FGR8 921 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 AKR1B1P15121 316 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 VEGFAP15692 232 aaPredicted RBP22.17■■□□□ 1.14
HOXC4-201ENST00000303406 BAG6P46379 1132 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 TPM4P67936 248 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 AOPEPQ8N6M6 819 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 TRIML1Q8N9V2 468 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 SLC16A10Q8TF71 515 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 ERCC4Q92889 916 aaPredicted RBP22.17■■□□□ 1.14
HOXC4-201ENST00000303406 RRP36Q96EU6 259 aaKnown RBP22.17■■□□□ 1.14
HOXC4-201ENST00000303406 ZMYND12Q9H0C1 365 aa22.17■■□□□ 1.14
HOXC4-201ENST00000303406 MYO1BO43795 1136 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 TTLL1O95922 423 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 PDHBP11177 359 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 POSTNQ15063 836 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 GPKOWQ92917 476 aaPredicted RBP eCLIP22.16■■□□□ 1.14
HOXC4-201ENST00000303406 SIPA1L1O43166 1804 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 POLR2DO15514 142 aaKnown RBP22.16■■□□□ 1.14
HOXC4-201ENST00000303406 ACTN4O43707 911 aaKnown RBP22.16■■□□□ 1.14
HOXC4-201ENST00000303406 PTGDRQ13258 359 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 PNOCQ13519 176 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 ZNF174Q15697 407 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 TYW1BQ6NUM6 668 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 PCDHA6Q9UN73 950 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 PCDHA8Q9Y5H6 950 aa22.16■■□□□ 1.14
HOXC4-201ENST00000303406 CCDC194A0A1B0GVG4 234 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 GNA11P29992 359 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 SARSP49591 514 aaKnown RBP22.15■■□□□ 1.14
HOXC4-201ENST00000303406 NOM1Q5C9Z4 860 aaKnown RBP22.15■■□□□ 1.14
HOXC4-201ENST00000303406 HEATR3Q7Z4Q2 680 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 PIBF1Q8WXW3 757 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 VPS33BQ9H267 617 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 KCNQ5Q9NR82 932 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 SEC63Q9UGP8 760 aaKnown RBP22.15■■□□□ 1.14
HOXC4-201ENST00000303406 SERTAD1Q9UHV2 236 aa22.15■■□□□ 1.14
HOXC4-201ENST00000303406 LAD1O00515 517 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 WNT7AO00755 349 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 ORC2Q13416 577 aaPredicted RBP22.14■■□□□ 1.13
HOXC4-201ENST00000303406 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
HOXC4-201ENST00000303406 AOC3Q16853 763 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 CCDC93Q567U6 631 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 CT47A1Q5JQC4 288 aaPredicted RBP22.14■■□□□ 1.13
HOXC4-201ENST00000303406 SPECC1Q5M775 1068 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 USP17L2Q6R6M4 530 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 KRT25Q7Z3Z0 450 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 KIAA0825Q8IV33 1275 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 RTKN2Q8IZC4 609 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 SPATA20Q8TB22 786 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 PSMD1Q99460 953 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 C6orf50Q9HD87 102 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 PCDHA5Q9Y5H7 936 aa22.14■■□□□ 1.13
HOXC4-201ENST00000303406 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 USP17L5A8MUK1 530 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 SLFN14P0C7P3 912 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 GOLGA8HP0CJ92 632 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 LONP1P36776 959 aaKnown RBP22.13■■□□□ 1.13
HOXC4-201ENST00000303406 NFIAQ12857 509 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 SH3RF1Q7Z6J0 888 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 FOXP4Q8IVH2 680 aaPredicted RBP22.13■■□□□ 1.13
HOXC4-201ENST00000303406 C4orf32Q8N8J7 132 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 PI4KBQ9UBF8 816 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 BAZ2BQ9UIF8 2168 aaKnown RBP22.13■■□□□ 1.13
HOXC4-201ENST00000303406 ATRNL1Q5VV63 1379 aa22.13■■□□□ 1.13
HOXC4-201ENST00000303406 A0A087WWV3 80 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 BIN1O00499 593 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 ENTPD3O75355 529 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 OFD1O75665 1012 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 NCAPHQ15003 741 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 PPP1R18Q6NYC8 613 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 TTLL6Q8N841 843 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 SYMPKQ92797 1274 aaKnown RBP22.12■■□□□ 1.13
HOXC4-201ENST00000303406 FAM198AQ9UFP1 575 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 DACH1Q9UI36 760 aa22.12■■□□□ 1.13
HOXC4-201ENST00000303406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.11■■□□□ 1.13
HOXC4-201ENST00000303406 PPIP5K2O43314 1243 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 SMC2O95347 1197 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 NAPAP54920 295 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 GPATCH4Q5T3I0 446 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms